HL_6GZX_093

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GUCUGGGGGAUGACCCCAGGC

Length

21 nucleotides

Bulged bases

6GZX|1|A2|A|1224

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|1212
6GZX|1|A2|U|1213
6GZX|1|A2|C|1214
6GZX|1|A2|U|1215
6GZX|1|A2|G|1216
6GZX|1|A2|G|1217
6GZX|1|A2|G|1218
6GZX|1|A2|G|1219
6GZX|1|A2|G|1220
6GZX|1|A2|A|1221
6GZX|1|A2|U|1222
6GZX|1|A2|G|1223
6GZX|1|A2|A|1224
6GZX|1|A2|C|1225
6GZX|1|A2|C|1226
6GZX|1|A2|C|1227
6GZX|1|A2|C|1228
6GZX|1|A2|A|1229
6GZX|1|A2|G|1230
6GZX|1|A2|G|1231
6GZX|1|A2|C|1232

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain Q2

50S ribosomal protein L21

Chain Y2

50S ribosomal protein L30