HL_6GZX_117

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGGGACGGAAAUCCG

Length

15 nucleotides

Bulged bases

6GZX|1|A2|A|2324

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|C|2315
6GZX|1|A2|G|2316
6GZX|1|A2|G|2317
6GZX|1|A2|G|2318
6GZX|1|A2|A|2319
6GZX|1|A2|C|2320
6GZX|1|A2|G|2321
6GZX|1|A2|G|2322
6GZX|1|A2|A|2323
6GZX|1|A2|A|2324
6GZX|1|A2|A|2325
6GZX|1|A2|U|2326
6GZX|1|A2|C|2327
6GZX|1|A2|C|2328
6GZX|1|A2|G|2329

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain B2

5S ribosomal RNA; 5S rRNA

Chain F2

50S ribosomal protein L5

Chain N2

50S ribosomal protein L18