HL_6GZX_121

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GUCCCGUGUGGAAGGGC

Length

17 nucleotides

Bulged bases

6GZX|1|A2|C|2416, 6GZX|1|A2|U|2420

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|2414
6GZX|1|A2|U|2415
6GZX|1|A2|C|2416
6GZX|1|A2|C|2417
6GZX|1|A2|C|2418
6GZX|1|A2|G|2419
6GZX|1|A2|U|2420
6GZX|1|A2|G|2421
6GZX|1|A2|U|2422
6GZX|1|A2|G|2423
6GZX|1|A2|G|2424
6GZX|1|A2|A|2425
6GZX|1|A2|A|2426
6GZX|1|A2|G|2427
6GZX|1|A2|G|2428
6GZX|1|A2|G|2429
6GZX|1|A2|C|2430

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain K2

50S ribosomal protein L15

Chain W2

50S ribosomal protein L28

Chain b2

50S ribosomal protein L33

Chain d2

50S ribosomal protein L35