HL_6GZX_128

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGAUAACCGCUGAAAGCAUCUAAGCGGGAAGCC

Length

33 nucleotides

Bulged bases

6GZX|1|A2|G|2766

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|2751
6GZX|1|A2|G|2752
6GZX|1|A2|A|2753
6GZX|1|A2|U|2754
6GZX|1|A2|A|2755
6GZX|1|A2|A|2756
6GZX|1|A2|C|2757
6GZX|1|A2|C|2758
6GZX|1|A2|G|2759
6GZX|1|A2|C|2760
6GZX|1|A2|U|2761
6GZX|1|A2|G|2762
6GZX|1|A2|A|2763
6GZX|1|A2|A|2764
6GZX|1|A2|A|2765
6GZX|1|A2|G|2766
6GZX|1|A2|C|2767
6GZX|1|A2|A|2768
6GZX|1|A2|U|2769
6GZX|1|A2|C|2770
6GZX|1|A2|U|2771
6GZX|1|A2|A|2772
6GZX|1|A2|A|2773
6GZX|1|A2|G|2774
6GZX|1|A2|C|2775
6GZX|1|A2|G|2776
6GZX|1|A2|G|2777
6GZX|1|A2|G|2778
6GZX|1|A2|A|2779
6GZX|1|A2|A|2780
6GZX|1|A2|G|2781
6GZX|1|A2|C|2782
6GZX|1|A2|C|2783

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L3

Chain G2

50S ribosomal protein L6

Chain I2

50S ribosomal protein L13

Chain e2

50S ribosomal protein L36