HL_6GZX_160

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6GZX|1|A3|A|1431

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZX_160 not in the Motif Atlas

Geometric match to HL_7RQB_011

Geometric discrepancy: 0.1852

The information below is about HL_7RQB_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_70546.1

Basepair signature

cWW-F

Number of instances in this motif group

18

Unit IDs

6GZX|1|A3|C|1429
6GZX|1|A3|U|1430
6GZX|1|A3|A|1431
6GZX|1|A3|C|1432
6GZX|1|A3|G|1433
6GZX|1|A3|G|1434

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain T3

30S ribosomal protein S20