HL_6GZX_175

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GAGUAGCGGUGAAAUGCGCAGAUAC

Length

25 nucleotides

Bulged bases

6GZX|1|A4|A|685

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|G|666
6GZX|1|A4|A|667
6GZX|1|A4|G|668
6GZX|1|A4|U|669
6GZX|1|A4|A|670
6GZX|1|A4|G|671
6GZX|1|A4|C|672
6GZX|1|A4|G|673
6GZX|1|A4|G|674
6GZX|1|A4|U|675
6GZX|1|A4|G|676
6GZX|1|A4|A|677
6GZX|1|A4|A|678
6GZX|1|A4|A|679
6GZX|1|A4|U|680
6GZX|1|A4|G|681
6GZX|1|A4|C|682
6GZX|1|A4|G|683
6GZX|1|A4|C|684
6GZX|1|A4|A|685
6GZX|1|A4|G|686
6GZX|1|A4|A|687
6GZX|1|A4|U|688
6GZX|1|A4|A|689
6GZX|1|A4|C|690

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain G4

30S ribosomal protein S7

Chain K4

30S ribosomal protein S11

Chain V4

Ribosome hibernation promoting factor