HL_6GZX_181

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CGAAGCAACGCG

Length

12 nucleotides

Bulged bases

6GZX|1|A4|A|945, 6GZX|1|A4|G|948

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|C|939
6GZX|1|A4|G|940
6GZX|1|A4|A|941
6GZX|1|A4|A|942
6GZX|1|A4|G|943
6GZX|1|A4|C|944
6GZX|1|A4|A|945
6GZX|1|A4|A|946
6GZX|1|A4|C|947
6GZX|1|A4|G|948
6GZX|1|A4|C|949
6GZX|1|A4|G|950

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain I4

30S ribosomal protein S9

Chain J4

30S ribosomal protein S10

Chain M4

30S ribosomal protein S13

Chain N4

30S ribosomal protein S14 type Z

Chain V4

Ribosome hibernation promoting factor