HL_6GZX_185

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GUUAGUUGCCAGCGGUUCGGCCGGGCACUCUAAC

Length

34 nucleotides

Bulged bases

6GZX|1|A4|U|1107, 6GZX|1|A4|U|1108, 6GZX|1|A4|U|1118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|G|1102
6GZX|1|A4|U|1103
6GZX|1|A4|U|1104
6GZX|1|A4|A|1105
6GZX|1|A4|G|1106
6GZX|1|A4|U|1107
6GZX|1|A4|U|1108
6GZX|1|A4|G|1109
6GZX|1|A4|C|1110
6GZX|1|A4|C|1111
6GZX|1|A4|A|1112
6GZX|1|A4|G|1113
6GZX|1|A4|C|1114
6GZX|1|A4|G|1115
6GZX|1|A4|G|1116
6GZX|1|A4|U|1117
6GZX|1|A4|U|1118
6GZX|1|A4|C|1119
6GZX|1|A4|G|1120
6GZX|1|A4|G|1121
6GZX|1|A4|C|1122
6GZX|1|A4|C|1123
6GZX|1|A4|G|1124
6GZX|1|A4|G|1125
6GZX|1|A4|G|1126
6GZX|1|A4|C|1127
6GZX|1|A4|A|1128
6GZX|1|A4|C|1129
6GZX|1|A4|U|1130
6GZX|1|A4|C|1131
6GZX|1|A4|U|1132
6GZX|1|A4|A|1133
6GZX|1|A4|A|1134
6GZX|1|A4|C|1135

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain I4

30S ribosomal protein S9

Chain J4

30S ribosomal protein S10

Chain N4

30S ribosomal protein S14 type Z