HL_6GZX_201

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CCUAAGGUGAAGCCGAAAGGCGUAGCCGAAGG

Length

32 nucleotides

Bulged bases

6GZX|1|A1|A|1427

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|C|1398
6GZX|1|A1|C|1399
6GZX|1|A1|U|1400
6GZX|1|A1|A|1401
6GZX|1|A1|A|1402
6GZX|1|A1|G|1403
6GZX|1|A1|G|1404
6GZX|1|A1|U|1405
6GZX|1|A1|G|1406
6GZX|1|A1|A|1407
6GZX|1|A1|A|1408
6GZX|1|A1|G|1409
6GZX|1|A1|C|1410
6GZX|1|A1|C|1411
6GZX|1|A1|G|1412
6GZX|1|A1|A|1413
6GZX|1|A1|A|1414
6GZX|1|A1|A|1415
6GZX|1|A1|G|1416
6GZX|1|A1|G|1417
6GZX|1|A1|C|1418
6GZX|1|A1|G|1419
6GZX|1|A1|U|1420
6GZX|1|A1|A|1421
6GZX|1|A1|G|1422
6GZX|1|A1|C|1423
6GZX|1|A1|C|1424
6GZX|1|A1|G|1425
6GZX|1|A1|A|1426
6GZX|1|A1|A|1427
6GZX|1|A1|G|1428
6GZX|1|A1|G|1429

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2

Chain W1

50S ribosomal protein L28

Chain c1

50S ribosomal protein L34