HL_6GZX_202

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CCGGAGCCAUGGACGAGCCCGG

Length

22 nucleotides

Bulged bases

6GZX|1|A1|A|1502, 6GZX|1|A1|U|1503, 6GZX|1|A1|G|1504, 6GZX|1|A1|A|1509

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|C|1494
6GZX|1|A1|C|1495
6GZX|1|A1|G|1496
6GZX|1|A1|G|1497
6GZX|1|A1|A|1498
6GZX|1|A1|G|1499
6GZX|1|A1|C|1500
6GZX|1|A1|C|1501
6GZX|1|A1|A|1502
6GZX|1|A1|U|1503
6GZX|1|A1|G|1504
6GZX|1|A1|G|1505
6GZX|1|A1|A|1506
6GZX|1|A1|C|1507
6GZX|1|A1|G|1508
6GZX|1|A1|A|1509
6GZX|1|A1|G|1510
6GZX|1|A1|C|1511
6GZX|1|A1|C|1512
6GZX|1|A1|C|1513
6GZX|1|A1|G|1514
6GZX|1|A1|G|1515

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain M1

50S ribosomal protein L17