HL_6GZX_203

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

AGGUAGGCAAAUCCGCCU

Length

18 nucleotides

Bulged bases

6GZX|1|A1|A|1538, 6GZX|1|A1|C|1541, 6GZX|1|A1|A|1542, 6GZX|1|A1|U|1545, 6GZX|1|A1|C|1546

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A1|A|1534
6GZX|1|A1|G|1535
6GZX|1|A1|G|1536
6GZX|1|A1|U|1537
6GZX|1|A1|A|1538
6GZX|1|A1|G|1539
6GZX|1|A1|G|1540
6GZX|1|A1|C|1541
6GZX|1|A1|A|1542
6GZX|1|A1|A|1543
6GZX|1|A1|A|1544
6GZX|1|A1|U|1545
6GZX|1|A1|C|1546
6GZX|1|A1|C|1547
6GZX|1|A1|G|1548
6GZX|1|A1|C|1549
6GZX|1|A1|C|1550
6GZX|1|A1|U|1551

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain C1

50S ribosomal protein L2