HL_6GZX_220

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGAAGCCCGUACGGGUGACAAC

Length

22 nucleotides

Bulged bases

6GZX|1|A2|A|1576, 6GZX|1|A2|G|1582, 6GZX|1|A2|U|1583, 6GZX|1|A2|A|1584, 6GZX|1|A2|C|1592

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|1574
6GZX|1|A2|G|1575
6GZX|1|A2|A|1576
6GZX|1|A2|A|1577
6GZX|1|A2|G|1578
6GZX|1|A2|C|1579
6GZX|1|A2|C|1580
6GZX|1|A2|C|1581
6GZX|1|A2|G|1582
6GZX|1|A2|U|1583
6GZX|1|A2|A|1584
6GZX|1|A2|C|1585
6GZX|1|A2|G|1586
6GZX|1|A2|G|1587
6GZX|1|A2|G|1588
6GZX|1|A2|U|1589
6GZX|1|A2|G|1590
6GZX|1|A2|A|1591
6GZX|1|A2|C|1592
6GZX|1|A2|A|1593
6GZX|1|A2|A|1594
6GZX|1|A2|C|1595

Current chains

Chain A2

23S ribosomal RNA

Nearby chains