HL_6GZX_224

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GACUGGGGCGGUC

Length

13 nucleotides

Bulged bases

6GZX|1|A2|G|2264

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A2|G|2260
6GZX|1|A2|A|2261
6GZX|1|A2|C|2262
6GZX|1|A2|U|2263
6GZX|1|A2|G|2264
6GZX|1|A2|G|2265
6GZX|1|A2|G|2266
6GZX|1|A2|G|2267
6GZX|1|A2|C|2268
6GZX|1|A2|G|2269
6GZX|1|A2|G|2270
6GZX|1|A2|U|2271
6GZX|1|A2|C|2272

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L16

Chain V2

50S ribosomal protein L27