HL_6GZX_230

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GCCGGUCUGAGAGGAUGGCCGGC

Length

23 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A3|G|284
6GZX|1|A3|C|285
6GZX|1|A3|C|286
6GZX|1|A3|G|287
6GZX|1|A3|G|288
6GZX|1|A3|U|289
6GZX|1|A3|C|290
6GZX|1|A3|U|291
6GZX|1|A3|G|292
6GZX|1|A3|A|293
6GZX|1|A3|G|294
6GZX|1|A3|A|295
6GZX|1|A3|G|296
6GZX|1|A3|G|297
6GZX|1|A3|A|298
6GZX|1|A3|U|299
6GZX|1|A3|G|300
6GZX|1|A3|G|301
6GZX|1|A3|C|302
6GZX|1|A3|C|303
6GZX|1|A3|G|304
6GZX|1|A3|G|305
6GZX|1|A3|C|306

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain D3

30S ribosomal protein S4

Chain E3

30S ribosomal protein S5

Chain L3

30S ribosomal protein S12

Chain P3

30S ribosomal protein S16

Chain Q3

30S ribosomal protein S17