HL_6GZX_240

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

CAAACCGGAUUAGAUACCCGGGUAG

Length

25 nucleotides

Bulged bases

6GZX|1|A4|U|772

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|C|762
6GZX|1|A4|A|763
6GZX|1|A4|A|764
6GZX|1|A4|A|765
6GZX|1|A4|C|766
6GZX|1|A4|C|767
6GZX|1|A4|G|768
6GZX|1|A4|G|769
6GZX|1|A4|A|770
6GZX|1|A4|U|771
6GZX|1|A4|U|772
6GZX|1|A4|A|773
6GZX|1|A4|G|774
6GZX|1|A4|A|775
6GZX|1|A4|U|776
6GZX|1|A4|A|777
6GZX|1|A4|C|778
6GZX|1|A4|C|779
6GZX|1|A4|C|780
6GZX|1|A4|G|781
6GZX|1|A4|G|782
6GZX|1|A4|G|783
6GZX|1|A4|U|784
6GZX|1|A4|A|785
6GZX|1|A4|G|786

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain K4

30S ribosomal protein S11

Chain V4

Ribosome hibernation promoting factor