HL_6GZX_241

3D structure

PDB id

6GZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (ice)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.57 Å

Loop

Sequence

GGUCUGCAACCCGACC

Length

16 nucleotides

Bulged bases

6GZX|1|A4|C|1298, 6GZX|1|A4|A|1299

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZX|1|A4|G|1292
6GZX|1|A4|G|1293
6GZX|1|A4|U|1294
6GZX|1|A4|C|1295
6GZX|1|A4|U|1296
6GZX|1|A4|G|1297
6GZX|1|A4|C|1298
6GZX|1|A4|A|1299
6GZX|1|A4|A|1300
6GZX|1|A4|C|1301
6GZX|1|A4|C|1302
6GZX|1|A4|C|1303
6GZX|1|A4|G|1304
6GZX|1|A4|A|1305
6GZX|1|A4|C|1306
6GZX|1|A4|C|1307

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain M4

30S ribosomal protein S13

Chain N4

30S ribosomal protein S14 type Z

Chain S4

30S ribosomal protein S19

Chain U4

30S ribosomal protein Thx

Chain Z2

50S ribosomal protein L31