HL_6GZX_248
3D structure
- PDB id
- 6GZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (ice)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.57 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 6GZX|1|A1|A|2054, 6GZX|1|A1|A|2055, 6GZX|1|A1|G|2056
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZX_248 not in the Motif Atlas
- Homologous match to HL_4WF9_047
- Geometric discrepancy: 0.2086
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
6GZX|1|A1|G|2051
6GZX|1|A1|U|2052
6GZX|1|A1|G|2053
6GZX|1|A1|A|2054
6GZX|1|A1|A|2055
6GZX|1|A1|G|2056
6GZX|1|A1|A|2057
6GZX|1|A1|U|2058
6GZX|1|A1|G|2059
6GZX|1|A1|C|2060
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain D1
- 50S ribosomal protein L3
- Chain Q1
- 50S ribosomal protein L21
- Chain a1
- 50S ribosomal protein L32
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