HL_6GZZ_008

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UGAGUAGCGGCGAGCGAAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|U|229
6GZZ|1|A1|G|230
6GZZ|1|A1|A|231
6GZZ|1|A1|G|232
6GZZ|1|A1|U|233
6GZZ|1|A1|A|234
6GZZ|1|A1|G|235
6GZZ|1|A1|C|236
6GZZ|1|A1|G|237
6GZZ|1|A1|G|238
6GZZ|1|A1|C|239
6GZZ|1|A1|G|240
6GZZ|1|A1|A|241
6GZZ|1|A1|G|242
6GZZ|1|A1|C|243
6GZZ|1|A1|G|244
6GZZ|1|A1|A|245
6GZZ|1|A1|A|246
6GZZ|1|A1|A|247
6GZZ|1|A1|G|248

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain K1

50S ribosomal protein L15

Chain W1

50S ribosomal protein L28

Chain d1

50S ribosomal protein L35