RNA 3D Hub //

6GZZ Hairpin, Internal, and multi-helix Junction Loop Motifs

Download loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_6GZZ_1921/A1/84:96No text annotation
geometric
HL_5NFV_001
HL_69752.4
HL_6GZZ_0021/A1/86:93No text annotation
HL_6GZZ_0031/A1/121:126No text annotation
homologous
HL_4WF9_003
HL_75660.7
HL_6GZZ_0061/A1/178:198No text annotation
HL_6GZZ_0081/A1/229:248No text annotation
HL_6GZZ_0091/A1/270:276No text annotation
homologous
HL_4WF9_009
HL_40612.1
HL_6GZZ_0111/A1/352:360T-loop with unstacked turn
homologous
HL_4WF9_012
HL_27670.3
HL_6GZZ_0121/A1/410:420No text annotation
homologous
HL_7RQB_013
NA
HL_6GZZ_2371/A1/437:446No text annotation
HL_6GZZ_1941/A1/490:495GNRA
homologous
HL_4WF9_015
HL_34789.2
HL_6GZZ_1951/A1/564:581No text annotation
HL_6GZZ_0161/A1/569:576No text annotation
HL_6GZZ_0171/A1/591:600No text annotation
homologous
HL_7RQB_018
NA
HL_6GZZ_1961/A1/756:773No text annotation
HL_6GZZ_0211/A1/758:771No text annotation
HL_6GZZ_0221/A1/793:802No text annotation
homologous
HL_7A0S_022
HL_50204.1
HL_6GZZ_0231/A1/828:834No text annotation
homologous
HL_4WF9_024
HL_92935.1
HL_6GZZ_0241/A1/874:881No text annotation
geometric
HL_7KI3_001
HL_75660.7
HL_6GZZ_1971/A1/999:1012No text annotation
HL_6GZZ_0261/A1/1002:1009GNRA
homologous
HL_7RQB_027
NA
HL_6GZZ_0271/A1/1026:1033No text annotation
homologous
HL_7RQB_028
NA
HL_6GZZ_0281/A1/1086:1165No text annotation
HL_6GZZ_0311/A1/1325:1341No text annotation
HL_6GZZ_1981/A1/1363:1385No text annotation
HL_6GZZ_0321/A1/1371:1379No text annotation
HL_6GZZ_0331/A1/1411:1416GNRA
homologous
HL_7RQB_035
NA
HL_6GZZ_2381/A1/1437:1446No text annotation
homologous
HL_9DFE_034
HL_77449.1
HL_6GZZ_0371/A1/1614:1617Mini UNCG
homologous
HL_4WF9_037
HL_90436.2
HL_6GZZ_1991/A1/1660:1668No text annotation
HL_6GZZ_0381/A1/1676:1687No text annotation
HL_6GZZ_0391/A1/1740:1745UNCG
homologous
HL_4WF9_040
HL_61337.2
HL_6GZZ_0421/A1/1809:1821No text annotation
homologous
HL_7A0S_045
HL_50951.1
HL_6GZZ_0431/A1/1839:1844GNRA related
homologous
HL_5J7L_179
NA
HL_6GZZ_0441/A1/1895:1904Externally structured
geometric
HL_5TBW_022
NA
HL_6GZZ_0451/A1/1933:1945No text annotation
HL_6GZZ_2401/A1/1971:1983No text annotation
HL_6GZZ_0461/A1/1973:1981No text annotation
homologous
HL_4WF9_046
HL_61418.2
HL_6GZZ_0471/A1/2051:2060No text annotation
homologous
HL_7A0S_049
HL_78372.1
HL_6GZZ_0481/A1/2144:2202No text annotation
HL_6GZZ_0501/A1/2262:2270No text annotation
homologous
HL_4WF9_049
HL_11974.2
HL_6GZZ_2411/A1/2277:2291No text annotation
HL_6GZZ_2011/A1/2297:2339No text annotation
HL_6GZZ_0521/A1/2338:2345Pseudoknot geometry
homologous
HL_7A0S_055
HL_52651.2
HL_6GZZ_0531/A1/2364:2381No text annotation
HL_6GZZ_0541/A1/2387:2394No text annotation
HL_6GZZ_0551/A1/2414:2430No text annotation
HL_6GZZ_0561/A1/2485:2493No text annotation
HL_6GZZ_0571/A1/2536:2557No text annotation
HL_6GZZ_0581/A1/2564:2572No text annotation
geometric
HL_5NFV_001
HL_69752.4
HL_6GZZ_0591/A1/2608:2613GNRA
homologous
HL_7A0S_062
HL_34789.2
HL_6GZZ_0611/A1/2713:2722No text annotation
HL_6GZZ_0621/A1/2759:2775No text annotation
homologous
HL_7A0S_074
NA
HL_6GZZ_2421/A1/2830:2840No text annotation
HL_6GZZ_0661/A2/84:96No text annotation
geometric
HL_5NFV_001
HL_69752.4
HL_6GZZ_0671/A2/121:126No text annotation
homologous
HL_4WF9_003
HL_75660.7
HL_6GZZ_0701/A2/178:198No text annotation
HL_6GZZ_0721/A2/229:248No text annotation
HL_6GZZ_0761/A2/352:360T-loop with unstacked turn
homologous
HL_5J7L_144
NA
HL_6GZZ_0781/A2/437:446Pseudoknot geometry
geometric
HL_3D0U_002
HL_52651.2
HL_6GZZ_2061/A2/490:495GNRA
homologous
HL_4WF9_015
HL_34789.2
HL_6GZZ_2071/A2/566:579No text annotation
HL_6GZZ_0811/A2/569:576No text annotation
HL_6GZZ_0821/A2/591:600No text annotation
geometric
HL_7RQB_018
NA
HL_6GZZ_2441/A2/761:768No text annotation
HL_6GZZ_0871/A2/793:802No text annotation
geometric
HL_7A0S_022
HL_50204.1
HL_6GZZ_0881/A2/828:834No text annotation
homologous
HL_4WF9_024
HL_92935.1
HL_6GZZ_0891/A2/874:881No text annotation
HL_6GZZ_2091/A2/999:1012No text annotation
HL_6GZZ_0911/A2/1002:1009GNRA
homologous
HL_7RQB_027
NA
HL_6GZZ_0921/A2/1026:1033No text annotation
homologous
HL_7RQB_028
NA
HL_6GZZ_2451/A2/1091:1160No text annotation
HL_6GZZ_0931/A2/1100:1155No text annotation
HL_6GZZ_0951/A2/1270:1275GNRA
homologous
HL_7RQB_032
NA
HL_6GZZ_0961/A2/1325:1341No text annotation
HL_6GZZ_0971/A2/1365:1383No text annotation
HL_6GZZ_0981/A2/1405:1422No text annotation
HL_6GZZ_0991/A2/1437:1446No text annotation
homologous
HL_7RQB_036
NA
HL_6GZZ_1001/A2/1497:1512No text annotation
HL_6GZZ_1011/A2/1536:1549No text annotation
HL_6GZZ_1021/A2/1614:1617Mini UNCG
homologous
HL_4WF9_037
HL_90436.2
HL_6GZZ_1031/A2/1659:1668No text annotation
geometric
HL_5NFV_001
HL_69752.4
HL_6GZZ_1041/A2/1676:1687No text annotation
HL_6GZZ_1051/A2/1740:1745UNCG
homologous
HL_4WF9_040
HL_61337.2
HL_6GZZ_1081/A2/1809:1821No text annotation
homologous
HL_7A0S_045
HL_50951.1
HL_6GZZ_1091/A2/1839:1844GNRA related
homologous
HL_5J7L_179
NA
HL_6GZZ_2461/A2/1971:1983No text annotation
HL_6GZZ_1111/A2/1973:1981No text annotation
homologous
HL_4WF9_046
HL_61418.2
HL_6GZZ_1121/A2/2051:2060No text annotation
homologous
HL_7A0S_049
HL_78372.1
HL_6GZZ_1131/A2/2120:2217No text annotation
HL_6GZZ_1141/A2/2228:2233Mini UNCG
geometric
HL_4TUW_002
HL_12626.2
HL_6GZZ_2471/A2/2262:2270No text annotation
homologous
HL_7A0S_052
HL_11974.2
HL_6GZZ_1161/A2/2276:2292No text annotation
HL_6GZZ_2131/A2/2314:2331No text annotation
HL_6GZZ_1181/A2/2370:2376No text annotation
geometric
HL_4LFB_002
HL_46665.2
HL_6GZZ_1191/A2/2387:2394No text annotation
geometric
HL_8VTW_025
NA
HL_6GZZ_1201/A2/2414:2430No text annotation
HL_6GZZ_1211/A2/2479:2499No text annotation
HL_6GZZ_1221/A2/2542:2549No text annotation
geometric
HL_7RQB_009
NA
HL_6GZZ_1231/A2/2564:2572No text annotation
geometric
HL_5NFV_001
HL_69752.4
HL_6GZZ_1241/A2/2608:2613GNRA
homologous
HL_7A0S_062
HL_34789.2
HL_6GZZ_1261/A2/2713:2722No text annotation
HL_6GZZ_1271/A2/2759:2775No text annotation
homologous
HL_7A0S_074
NA
HL_6GZZ_2481/A2/2830:2840No text annotation
HL_6GZZ_1291/A2/2868:2873GNRA
homologous
HL_7RQB_069
NA
HL_6GZZ_2161/A3/12:22No text annotation
homologous
HL_5J7L_001
NA
HL_6GZZ_1331/A3/186:191No text annotation
homologous
HL_6CZR_075
NA
HL_6GZZ_1341/A3/204:213No text annotation
HL_6GZZ_2491/A3/254:262GNRA related
homologous
HL_4LFB_006
HL_87268.1
HL_6GZZ_2191/A3/287:303No text annotation
HL_6GZZ_1361/A3/291:296GNRA
homologous
HL_4LFB_007
HL_34789.2
HL_6GZZ_1371/A3/315:328No text annotation
homologous
HL_5J7L_008
NA
HL_6GZZ_2211/A3/372:381No text annotation
HL_6GZZ_1421/A3/504:511UNCG variation
geometric
HL_1P6V_001
NA
HL_6GZZ_1431/A3/600:606GNRA-like with tWH
homologous
HL_5J7L_014
NA
HL_6GZZ_1441/A3/665:691No text annotation
HL_6GZZ_1451/A3/769:779No text annotation
homologous
HL_6CZR_088
NA
HL_6GZZ_1471/A3/839:844GNRA
homologous
HL_4LFB_019
HL_34789.2
HL_6GZZ_1491/A3/939:950tRNA D-loop
geometric
HL_6UFM_001
HL_04642.3
HL_6GZZ_2501/A3/1058:1063GNRA
homologous
HL_5J7L_023
NA
HL_6GZZ_2251/A3/1071:1078T-loop related
homologous
HL_5J7L_024
NA
HL_6GZZ_1561/A3/1335:1350No text annotation
HL_6GZZ_1571/A3/1422:1438No text annotation
HL_6GZZ_1581/A3/1492:1497GNRA
geometric
HL_6CU1_002
HL_34789.2
HL_6GZZ_2261/A4/12:22No text annotation
homologous
HL_5J7L_001
NA
HL_6GZZ_2521/A4/63:97No text annotation
HL_6GZZ_1601/A4/67:95No text annotation
HL_6GZZ_1621/A4/184:193No text annotation
HL_6GZZ_2531/A4/254:262GNRA related
homologous
HL_4LFB_006
HL_87268.1
HL_6GZZ_2291/A4/287:303No text annotation
HL_6GZZ_1651/A4/315:328No text annotation
homologous
HL_5J7L_008
NA
HL_6GZZ_2541/A4/335:344No text annotation
HL_6GZZ_1671/A4/372:381No text annotation
geometric
HL_7KI3_001
HL_75660.7
HL_6GZZ_1711/A4/600:606No text annotation
homologous
HL_6CZR_085
NA
HL_6GZZ_1721/A4/665:691No text annotation
HL_6GZZ_1731/A4/769:779tRNA D-loop
geometric
HL_2ZZN_004
HL_57684.1
HL_6GZZ_1751/A4/839:844GNRA
homologous
HL_6CZR_090
NA
HL_6GZZ_1761/A4/874:879GNRA
homologous
HL_4LFB_020
HL_34789.2
HL_6GZZ_1791/A4/1057:1064No text annotation
HL_6GZZ_1801/A4/1070:1079No text annotation
HL_6GZZ_1851/A4/1335:1350No text annotation
HL_6GZZ_1871/A4/1492:1497GNRA
geometric
HL_3NPQ_001
HL_34789.2
HL_6GZZ_2341/B1/19:69No text annotation
HL_6GZZ_1881/B1/23:64No text annotation
HL_6GZZ_2351/B1/71:110No text annotation
HL_6GZZ_1891/B1/81:100No text annotation
HL_6GZZ_2361/B2/19:69No text annotation
HL_6GZZ_1901/B2/23:64No text annotation

Problematic loops

#loop idProblemSequence
HL_6GZZ_001No text annotation
HL_6GZZ_004No text annotation
HL_6GZZ_005No text annotation
HL_6GZZ_007No text annotation
HL_6GZZ_010No text annotation
HL_6GZZ_193No text annotation
HL_6GZZ_013No text annotation
HL_6GZZ_014GNRA with extra cWW
HL_6GZZ_015GNRA
HL_6GZZ_018No text annotation
HL_6GZZ_019GNRA
HL_6GZZ_020No text annotation
HL_6GZZ_025No text annotation
HL_6GZZ_029No text annotation
HL_6GZZ_030GNRA
HL_6GZZ_034No text annotation
HL_6GZZ_035No text annotation
HL_6GZZ_036No text annotation
HL_6GZZ_239No text annotation
HL_6GZZ_040No text annotation
HL_6GZZ_041No text annotation
HL_6GZZ_200No text annotation
HL_6GZZ_049Mini UNCG
HL_6GZZ_051No text annotation
HL_6GZZ_060No text annotation
HL_6GZZ_202No text annotation
HL_6GZZ_063No text annotation
HL_6GZZ_064GNRA
HL_6GZZ_065No text annotation
HL_6GZZ_068No text annotation
HL_6GZZ_069No text annotation
HL_6GZZ_203No text annotation
HL_6GZZ_243No text annotation
HL_6GZZ_071No text annotation
HL_6GZZ_073No text annotation
HL_6GZZ_074No text annotation
HL_6GZZ_075No text annotation
HL_6GZZ_204No text annotation
HL_6GZZ_077No text annotation
HL_6GZZ_205No text annotation
HL_6GZZ_079GNRA with extra cWW
HL_6GZZ_080GNRA
HL_6GZZ_083No text annotation
HL_6GZZ_084GNRA
HL_6GZZ_085GNRA
HL_6GZZ_086No text annotation
HL_6GZZ_208No text annotation
HL_6GZZ_090No text annotation
HL_6GZZ_210No text annotation
HL_6GZZ_094No text annotation
HL_6GZZ_106No text annotation
HL_6GZZ_107No text annotation
HL_6GZZ_211No text annotation
HL_6GZZ_110No text annotation
HL_6GZZ_212No text annotation
HL_6GZZ_115No text annotation
HL_6GZZ_117No text annotation
HL_6GZZ_214No text annotation
HL_6GZZ_125UNCG variation
HL_6GZZ_215No text annotation
HL_6GZZ_128No text annotation
HL_6GZZ_130No text annotation
HL_6GZZ_217No text annotation
HL_6GZZ_131No text annotation
HL_6GZZ_132GNRA
HL_6GZZ_218No text annotation
HL_6GZZ_135tRNA D-loop
HL_6GZZ_220No text annotation
HL_6GZZ_138UNCG
HL_6GZZ_139GNRA
HL_6GZZ_140No text annotation
HL_6GZZ_222No text annotation
HL_6GZZ_141No text annotation
HL_6GZZ_146Mini UNCG
HL_6GZZ_223GNRA with extra near cWW
HL_6GZZ_148GNRA
HL_6GZZ_150No text annotation
HL_6GZZ_224No text annotation
HL_6GZZ_151No text annotation
HL_6GZZ_152No text annotation
HL_6GZZ_153tRNA anticodon loop
HL_6GZZ_251GNRA
HL_6GZZ_154GNRA related
HL_6GZZ_155T-loop with 3 stacked bulged bases
HL_6GZZ_159No text annotation
HL_6GZZ_227No text annotation
HL_6GZZ_161GNRA
HL_6GZZ_228No text annotation
HL_6GZZ_163No text annotation
HL_6GZZ_164GNRA
HL_6GZZ_166No text annotation
HL_6GZZ_168No text annotation
HL_6GZZ_169No text annotation
HL_6GZZ_170UNCG variation
HL_6GZZ_174Mini UNCG
HL_6GZZ_230GNRA with extra near cWW
HL_6GZZ_177No text annotation
HL_6GZZ_178No text annotation
HL_6GZZ_231No text annotation
HL_6GZZ_232No text annotation
HL_6GZZ_181No text annotation
HL_6GZZ_182tRNA anticodon loop
HL_6GZZ_255GNRA
HL_6GZZ_183No text annotation
HL_6GZZ_184T-loop with 3 stacked bulged bases
HL_6GZZ_186No text annotation
HL_6GZZ_233No text annotation
HL_6GZZ_256No text annotation
HL_6GZZ_191GNRA

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_6GZZ_0011/A1/24:30,
1/A1/537:543		Triple sheared with non-canonical cWW
homologous
IL_7A0S_001
IL_22311.1
IL_6GZZ_3081/A1/297:320,
1/A1/368:389		No text annotation
IL_6GZZ_0071/A1/406:410,
1/A1/420:425		No text annotation
IL_6GZZ_0081/A1/514:515,
1/A1/520:522		Single stack bend with SAM intercalation
geometric
IL_2QWY_008
IL_75501.1
IL_6GZZ_0091/A1/562:564,
1/A1/581:584		No text annotation
geometric
IL_9M86_006
IL_32983.2
IL_6GZZ_0101/A1/589:591,
1/A1/600:602		Isolated non-canonical cWW pair
geometric
IL_7A0S_011
IL_71625.2
IL_6GZZ_0111/A1/622:624,
1/A1/708:709		Single stack bend
geometric
IL_7KGA_003
IL_15011.2
IL_6GZZ_0131/A1/629:636,
1/A1/644:651		No text annotation
IL_6GZZ_3101/A1/731:740,
1/A1/820:844		No text annotation
IL_6GZZ_0141/A1/746:747,
1/A1/812:814		Single bulged A
homologous
IL_7A0S_016
IL_14190.2
IL_6GZZ_3111/A1/787:790,
1/A1/805:807		No text annotation
homologous
IL_9DFE_020
IL_36931.2
IL_6GZZ_0161/A1/824:827,
1/A1/835:840		No text annotation
IL_6GZZ_3121/A1/886:889,
1/A1/985:989		No text annotation
IL_6GZZ_0181/A1/893:899,
1/A1/975:981		No text annotation
homologous
IL_9DFE_024
IL_68243.1
IL_6GZZ_0191/A1/907:911,
1/A1/963:967		5x5 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_7RQB_027
NA
IL_6GZZ_2231/A1/907:918,
1/A1/956:967		No text annotation
IL_6GZZ_0211/A1/913:918,
1/A1/956:960		No text annotation
geometric
IL_4V9F_035
IL_38603.1
IL_6GZZ_0231/A1/999:1002,
1/A1/1009:1012		Tandem non-canonical cWW pairs
geometric
IL_1MFQ_004
IL_15225.2
IL_6GZZ_0241/A1/1042:1044,
1/A1/1207:1208		Single bulged C
homologous
IL_7A0S_032
IL_05642.2
IL_6GZZ_0251/A1/1046:1050,
1/A1/1201:1205		UAA/GAN
homologous
IL_7A0S_033
IL_08938.1
IL_6GZZ_0261/A1/1051:1059,
1/A1/1198:1200		No text annotation
IL_6GZZ_0291/A1/1064:1072,
1/A1/1187:1195		No text annotation
IL_6GZZ_0301/A1/1072:1078,
1/A1/1172:1187		No text annotation
homologous
IL_7A0S_037
IL_50715.4
IL_6GZZ_0321/A1/1243:1245,
1/A1/1295:1298		Isolated near basepair
geometric
IL_4V88_406
NA
IL_6GZZ_2241/A1/1243:1248,
1/A1/1293:1298		No text annotation
IL_6GZZ_0331/A1/1245:1248,
1/A1/1293:1295		No text annotation
IL_6GZZ_3131/A1/1249:1262,
1/A1/1282:1292		No text annotation
IL_6GZZ_2271/A1/1346:1354,
1/A1/1670:1691		No text annotation
IL_6GZZ_0351/A1/1354:1357,
1/A1/1653:1670		No text annotation
IL_6GZZ_0371/A1/1365:1371,
1/A1/1379:1383		No text annotation
IL_6GZZ_0391/A1/1405:1411,
1/A1/1416:1422		No text annotation
IL_6GZZ_0421/A1/1497:1499,
1/A1/1511:1512		Single stack bend
homologous
IL_7RQB_058
NA
IL_6GZZ_3141/A1/1518:1522,
1/A1/1568:1571		UAA/GAN variation
homologous
IL_9DFE_059
IL_45790.1
IL_6GZZ_3151/A1/1530:1534,
1/A1/1551:1560		No text annotation
IL_6GZZ_0451/A1/1700:1705,
1/A1/2028:2030		No text annotation
homologous
IL_5J7L_304
NA
IL_6GZZ_0461/A1/1712:1723,
1/A1/2014:2021		No text annotation
IL_6GZZ_0471/A1/1735:1740,
1/A1/1745:1751		tSH-tSH-tHH-tHS
homologous
IL_7RQB_068
NA
IL_6GZZ_0481/A1/1803:1805,
1/A1/2003:2006		Isolated non-canonical cWW pair
geometric
IL_5UNE_007
IL_01003.2
IL_6GZZ_3161/A1/1831:1837,
1/A1/1846:1854		No text annotation
homologous
IL_9DFE_070
IL_17069.6
IL_6GZZ_0501/A1/1870:1873,
1/A1/1926:1927		Minor groove platform, major groove intercalation
homologous
IL_7A0S_066
IL_55206.1
IL_6GZZ_0511/A1/1874:1875,
1/A1/1922:1925		Major groove intercalation
homologous
IL_7A0S_067
IL_77710.1
IL_6GZZ_0551/A1/1957:1969,
1/A1/1985:1991		No text annotation
IL_6GZZ_0561/A1/2074:2076,
1/A1/2631:2632		Major groove platform
homologous
IL_4WF9_078
IL_48076.8
IL_6GZZ_0571/A1/2090:2097,
1/A1/2450:2458		No text annotation
IL_6GZZ_0581/A1/2105:2107,
1/A1/2250:2253		Isolated tHS basepair with bulges
geometric
IL_7RQB_012
NA
IL_6GZZ_0591/A1/2107:2109,
1/A1/2249:2250		Single stack bend
geometric
IL_5TBW_070
NA
IL_6GZZ_0601/A1/2109:2111,
1/A1/2246:2249		No text annotation
geometric
IL_4V87_185
NA
IL_6GZZ_2321/A1/2120:2144,
1/A1/2202:2217		No text annotation
IL_6GZZ_0611/A1/2303:2305,
1/A1/2355:2358		No text annotation
geometric
IL_4N0T_004
IL_32983.2
IL_6GZZ_0621/A1/2307:2338,
1/A1/2345:2353		No text annotation
IL_6GZZ_2331/A1/2340:2343,
1/A1/2400:2403		No text annotation
IL_6GZZ_2341/A1/2344:2386,
1/A1/2395:2399		No text annotation
IL_6GZZ_3171/A1/2471:2477,
1/A1/2501:2508		No text annotation
IL_6GZZ_0641/A1/2480:2484,
1/A1/2494:2498		Double sheared with non-canonical cWW
homologous
IL_7A0S_087
IL_87767.2
IL_6GZZ_0651/A1/2524:2527,
1/A1/2585:2592		No text annotation
IL_6GZZ_3181/A1/2605:2606,
1/A1/2615:2617		No text annotation
geometric
IL_9E6Q_092
IL_14190.2
IL_6GZZ_0671/A1/2650:2655,
1/A1/2788:2797		No text annotation
IL_6GZZ_3191/A1/2694:2698,
1/A1/2740:2742		C-loop
homologous
IL_5J7L_347
NA
IL_6GZZ_3201/A1/2700:2705,
1/A1/2733:2738		No text annotation
IL_6GZZ_0701/A1/2709:2710,
1/A1/2725:2729		Multiple bulged bases
homologous
IL_7A0S_097
IL_44609.2
IL_6GZZ_0711/A1/2751:2757,
1/A1/2777:2783		No text annotation
IL_6GZZ_3211/A1/2752:2759,
1/A1/2775:2782		No text annotation
IL_6GZZ_0741/A1/2854:2857,
1/A1/2883:2887		No text annotation
IL_6GZZ_0751/A1/2859:2865,
1/A1/2876:2881		No text annotation
IL_6GZZ_2411/A1/2859:2866,
1/A1/2875:2881		No text annotation
IL_6GZZ_0761/A2/24:30,
1/A2/537:543		Triple sheared with non-canonical cWW
homologous
IL_7A0S_001
IL_22311.1
IL_6GZZ_0771/A2/35:39,
1/A2/468:473		Partly complementary
geometric
IL_7VYX_008
IL_71154.2
IL_6GZZ_2421/A2/54:76,
1/A2/107:113		No text annotation
IL_6GZZ_2441/A2/296:297,
1/A2/389:391		Single stack bend
geometric
IL_7A0S_054
IL_15011.2
IL_6GZZ_3231/A2/297:316,
1/A2/374:389		No text annotation
IL_6GZZ_0821/A2/406:410,
1/A2/420:425		No text annotation
IL_6GZZ_0831/A2/560:562,
1/A2/584:585		Single stack bend
geometric
IL_7A0S_054
IL_15011.2
IL_6GZZ_0841/A2/562:564,
1/A2/581:584		No text annotation
geometric
IL_9M86_006
IL_32983.2
IL_6GZZ_0851/A2/589:591,
1/A2/600:602		Isolated non-canonical cWW pair
homologous
IL_7A0S_011
IL_71625.2
IL_6GZZ_2451/A2/629:636,
1/A2/644:651		No text annotation
IL_6GZZ_0861/A2/630:636,
1/A2/644:650		No text annotation
IL_6GZZ_3241/A2/720:740,
1/A2/820:858		No text annotation
IL_6GZZ_0871/A2/746:747,
1/A2/812:814		Single bulged A
homologous
IL_7A0S_016
IL_14190.2
IL_6GZZ_3251/A2/787:790,
1/A2/805:807		No text annotation
homologous
IL_9DFE_020
IL_36931.2
IL_6GZZ_0891/A2/790:792,
1/A2/804:805		Single stack bend
geometric
IL_4WF9_007
IL_15011.2
IL_6GZZ_0901/A2/792:793,
1/A2/802:804		Single stack bend
geometric
IL_7RQB_005
NA
IL_6GZZ_0911/A2/886:889,
1/A2/986:989		No text annotation
IL_6GZZ_0921/A2/889:890,
1/A2/984:986		Single stack bend
geometric
IL_7A0S_005
IL_15011.2
IL_6GZZ_2481/A2/893:899,
1/A2/975:981		No text annotation
homologous
IL_9DFE_024
IL_68243.1
IL_6GZZ_0941/A2/907:911,
1/A2/963:967		5x5 Sarcin-Ricin with intercalated A; G-bulge
geometric
IL_7RQB_027
NA
IL_6GZZ_3261/A2/907:918,
1/A2/956:967		No text annotation
IL_6GZZ_0961/A2/913:919,
1/A2/955:960		No text annotation
IL_6GZZ_0971/A2/999:1002,
1/A2/1009:1012		Tandem non-canonical cWW pairs
geometric
IL_1MFQ_004
IL_15225.2
IL_6GZZ_0991/A2/1046:1050,
1/A2/1201:1205		UAA/GAN
homologous
IL_7A0S_033
IL_08938.1
IL_6GZZ_1001/A2/1051:1059,
1/A2/1198:1200		No text annotation
IL_6GZZ_1011/A2/1059:1061,
1/A2/1197:1198		Single bulged U
geometric
IL_4V9F_039
IL_97561.2
IL_6GZZ_1031/A2/1064:1072,
1/A2/1187:1195		No text annotation
IL_6GZZ_1041/A2/1072:1078,
1/A2/1172:1187		No text annotation
geometric
IL_7RQB_040
NA
IL_6GZZ_1061/A2/1090:1100,
1/A2/1155:1161		No text annotation
IL_6GZZ_1071/A2/1243:1245,
1/A2/1295:1298		Isolated near basepair
geometric
IL_4V88_406
NA
IL_6GZZ_1081/A2/1245:1248,
1/A2/1293:1295		No text annotation
geometric
IL_4N0T_004
IL_32983.2
IL_6GZZ_3271/A2/1249:1253,
1/A2/1288:1292		No text annotation
IL_6GZZ_1101/A2/1255:1262,
1/A2/1282:1286		Kink-turn
homologous
IL_7RQB_047
NA
IL_6GZZ_2521/A2/1346:1352,
1/A2/1672:1691		No text annotation
IL_6GZZ_2531/A2/1354:1357,
1/A2/1653:1670		No text annotation
IL_6GZZ_2541/A2/1459:1469,
1/A2/1626:1639		No text annotation
IL_6GZZ_1131/A2/1461:1469,
1/A2/1626:1637		No text annotation
IL_6GZZ_1151/A2/1485:1489,
1/A2/1599:1604		No text annotation
IL_6GZZ_2561/A2/1518:1522,
1/A2/1568:1571		UAA/GAN variation
homologous
IL_9DFE_059
IL_45790.1
IL_6GZZ_3281/A2/1528:1531,
1/A2/1554:1562		No text annotation
IL_6GZZ_1181/A2/1700:1705,
1/A2/2028:2030		No text annotation
homologous
IL_5J7L_304
NA
IL_6GZZ_1191/A2/1712:1723,
1/A2/2014:2021		No text annotation
IL_6GZZ_1201/A2/1735:1740,
1/A2/1745:1751		tSH-tSH-tHH-tHS
geometric
IL_7RQB_068
NA
IL_6GZZ_1211/A2/1803:1805,
1/A2/2003:2006		Isolated non-canonical cWW pair
geometric
IL_5UNE_007
IL_01003.2
IL_6GZZ_2581/A2/1831:1837,
1/A2/1846:1854		No text annotation
homologous
IL_9DFE_070
IL_17069.6
IL_6GZZ_2591/A2/1869:1873,
1/A2/1926:1928		No text annotation
IL_6GZZ_1231/A2/1870:1874,
1/A2/1925:1927		No text annotation
IL_6GZZ_1241/A2/1874:1875,
1/A2/1922:1925		Major groove intercalation
geometric
IL_7A0S_067
IL_77710.1
IL_6GZZ_1261/A2/1884:1888,
1/A2/1911:1915		UAA/GAN with extra stack
geometric
IL_4WF9_073
IL_89021.3
IL_6GZZ_1271/A2/1889:1893,
1/A2/1906:1910		Triple sheared
homologous
IL_4WF9_074
IL_66798.3
IL_6GZZ_1281/A2/1957:1958,
1/A2/1988:1991		Multiple bulged bases
geometric
IL_1R3E_002
IL_05670.1
IL_6GZZ_1291/A2/1958:1969,
1/A2/1985:1988		No text annotation
homologous
IL_4WF9_077
IL_84014.1
IL_6GZZ_1301/A2/2074:2077,
1/A2/2630:2632		No text annotation
geometric
IL_6CZR_136
NA
IL_6GZZ_3301/A2/2091:2095,
1/A2/2452:2457		No text annotation
IL_6GZZ_1321/A2/2105:2107,
1/A2/2250:2253		Isolated tHS basepair with bulges
homologous
IL_7RQB_082
NA
IL_6GZZ_3311/A2/2105:2109,
1/A2/2249:2253		No text annotation
IL_6GZZ_1331/A2/2107:2109,
1/A2/2249:2250		Single stack bend
geometric
IL_5TBW_070
NA
IL_6GZZ_1341/A2/2109:2111,
1/A2/2246:2249		No text annotation
geometric
IL_4V87_185
NA
IL_6GZZ_2631/A2/2297:2314,
1/A2/2331:2339		No text annotation
IL_6GZZ_1351/A2/2314:2315,
1/A2/2329:2331		Single stack bend
geometric
IL_4WF9_007
IL_15011.2
IL_6GZZ_3321/A2/2340:2342,
1/A2/2401:2403		No text annotation
IL_6GZZ_1371/A2/2364:2370,
1/A2/2376:2381		No text annotation
IL_6GZZ_1391/A2/2468:2470,
1/A2/2509:2512		Decoding loop related
geometric
IL_3C3Z_002
IL_53541.1
IL_6GZZ_1401/A2/2471:2477,
1/A2/2501:2508		No text annotation
IL_6GZZ_1411/A2/2524:2527,
1/A2/2585:2592		No text annotation
IL_6GZZ_3331/A2/2536:2539,
1/A2/2552:2557		No text annotation
IL_6GZZ_3341/A2/2605:2606,
1/A2/2615:2617		Single bulged A
geometric
IL_8VFS_004
IL_14190.2
IL_6GZZ_1441/A2/2650:2655,
1/A2/2788:2797		No text annotation
IL_6GZZ_3351/A2/2694:2698,
1/A2/2740:2742		C-loop
homologous
IL_5J7L_347
NA
IL_6GZZ_3361/A2/2700:2705,
1/A2/2733:2738		No text annotation
IL_6GZZ_1481/A2/2709:2710,
1/A2/2725:2729		Multiple bulged bases
homologous
IL_7A0S_097
IL_44609.2
IL_6GZZ_3371/A2/2752:2757,
1/A2/2777:2782		UAA/GAN with extra cWW
homologous
IL_5J7L_350
NA
IL_6GZZ_3381/A2/2850:2853,
1/A2/2889:2892		No text annotation
IL_6GZZ_1521/A2/2853:2854,
1/A2/2887:2889		Single stack bend
geometric
IL_5TBW_070
NA
IL_6GZZ_1531/A2/2854:2857,
1/A2/2883:2887		No text annotation
IL_6GZZ_2701/A2/2854:2866,
1/A2/2875:2887		No text annotation
IL_6GZZ_1541/A2/2857:2865,
1/A2/2876:2883		No text annotation
IL_6GZZ_3391/A3/27:32,
1/A3/535:539		No text annotation
geometric
IL_8P9A_349
IL_71154.2
IL_6GZZ_2711/A3/40:46,
1/A3/390:397		No text annotation
IL_6GZZ_1561/A3/43:46,
1/A3/390:394		Tandem non-canonical cWW pairs
geometric
IL_4V88_429
NA
IL_6GZZ_3401/A3/54:57,
1/A3/350:352		No text annotation
IL_6GZZ_1601/A3/126:133,
1/A3/219:225		No text annotation
IL_6GZZ_1611/A3/180:182,
1/A3/195:197		Isolated non-canonical cWW pair
homologous
IL_4LFB_010
IL_01003.2
IL_6GZZ_3431/A3/237:248,
1/A3/268:279		No text annotation
IL_6GZZ_1621/A3/287:290,
1/A3/297:303		No text annotation
IL_6GZZ_2791/A3/483:494,
1/A3/523:528		No text annotation
IL_6GZZ_1661/A3/487:494,
1/A3/523:524		SSU/LSU pseudoknot
homologous
IL_6CZR_132
NA
IL_6GZZ_1671/A3/498:504,
1/A3/511:519		Kink-turn related
geometric
IL_4V88_415
NA
IL_6GZZ_1681/A3/552:558,
1/A3/857:858		No text annotation
homologous
IL_6CZR_134
NA
IL_6GZZ_1691/A3/560:567,
1/A3/740:747		No text annotation
IL_6GZZ_1701/A3/571:580,
1/A3/626:634		No text annotation
IL_6GZZ_2811/A3/571:582,
1/A3/622:634		No text annotation
IL_6GZZ_1711/A3/580:582,
1/A3/622:626		8-nt loop receptor
geometric
IL_6DME_002
IL_70784.1
IL_6GZZ_3441/A3/584:595,
1/A3/611:620		No text annotation
IL_6GZZ_2831/A3/638:651,
1/A3/721:734		No text annotation
IL_6GZZ_1741/A3/654:663,
1/A3/693:718		No text annotation
IL_6GZZ_2841/A3/757:761,
1/A3/787:788		Left turn
homologous
IL_5J7L_036
NA
IL_6GZZ_3461/A3/862:871,
1/A3/882:889		No text annotation
IL_6GZZ_1771/A3/864:871,
1/A3/882:887		8x6 Sarcin-Ricin with inserted Y; G-bulge
homologous
IL_4LFB_034
IL_84044.1
IL_6GZZ_1781/A3/899:900,
1/A3/1375:1377		Single bulged A
homologous
IL_6CZR_147
NA
IL_6GZZ_1791/A3/900:905,
1/A3/1371:1375		No text annotation
IL_6GZZ_2861/A3/1226:1236,
1/A3/1263:1273		No text annotation
IL_6GZZ_1831/A3/1284:1291,
1/A3/1308:1315		No text annotation
IL_6GZZ_1841/A3/1381:1383,
1/A3/1478:1481		No text annotation
homologous
IL_4LFB_056
IL_18228.1
IL_6GZZ_1851/A3/1383:1386,
1/A3/1474:1478		No text annotation
geometric
IL_8CRE_467
IL_25873.2
IL_6GZZ_1861/A3/1386:1391,
1/A3/1468:1474		No text annotation
homologous
IL_6CZR_369
NA
IL_6GZZ_3471/A3/1394:1405,
1/A3/1454:1465		No text annotation
IL_6GZZ_1871/A3/1413:1417,
1/A3/1443:1446		UAA/GAN related
geometric
IL_3FS0_001
IL_77691.7
IL_6GZZ_3481/A4/27:32,
1/A4/535:539		No text annotation
geometric
IL_8P9A_349
IL_71154.2
IL_6GZZ_1891/A4/28:33,
1/A4/534:538		No text annotation
geometric
IL_5TBW_121
NA
IL_6GZZ_1911/A4/47:53,
1/A4/353:356		No text annotation
IL_6GZZ_1931/A4/122:131,
1/A4/222:227		No text annotation
IL_6GZZ_1941/A4/131:133,
1/A4/219:222		No text annotation
geometric
IL_4V87_185
NA
IL_6GZZ_2921/A4/237:249,
1/A4/267:279		No text annotation
IL_6GZZ_1961/A4/287:290,
1/A4/297:303		No text annotation
IL_6GZZ_1981/A4/487:494,
1/A4/523:524		SSU/LSU pseudoknot
homologous
IL_6CZR_132
NA
IL_6GZZ_1991/A4/498:504,
1/A4/511:519		Kink-turn related
geometric
IL_4V88_415
NA
IL_6GZZ_2001/A4/552:558,
1/A4/857:858		No text annotation
homologous
IL_6CZR_134
NA
IL_6GZZ_2011/A4/560:567,
1/A4/740:747		No text annotation
IL_6GZZ_3511/A4/574:582,
1/A4/622:632		No text annotation
IL_6GZZ_2971/A4/638:651,
1/A4/721:734		No text annotation
IL_6GZZ_2041/A4/654:657,
1/A4/700:718		No text annotation
IL_6GZZ_2051/A4/657:663,
1/A4/693:700		No text annotation
homologous
IL_6CZR_363
NA
IL_6GZZ_2991/A4/753:761,
1/A4/787:792		No text annotation
IL_6GZZ_2061/A4/757:762,
1/A4/786:788		Other IL
geometric
IL_4V88_435
NA
IL_6GZZ_2071/A4/762:766,
1/A4/782:786		tSH-tHW-tHS
geometric
IL_4LFB_033
IL_05821.1
IL_6GZZ_3531/A4/862:873,
1/A4/880:889		No text annotation
IL_6GZZ_2081/A4/864:872,
1/A4/881:887		9x7 Sarcin-Ricin with inserted C; G-bulge
homologous
IL_6CZR_146
NA
IL_6GZZ_2091/A4/899:900,
1/A4/1375:1377		Single bulged A
geometric
IL_6CZR_147
NA
IL_6GZZ_2101/A4/900:905,
1/A4/1371:1375		No text annotation
IL_6GZZ_3021/A4/1226:1243,
1/A4/1254:1273		No text annotation
IL_6GZZ_2141/A4/1381:1383,
1/A4/1478:1481		No text annotation
homologous
IL_4LFB_056
IL_18228.1
IL_6GZZ_2151/A4/1383:1391,
1/A4/1468:1478		No text annotation
IL_6GZZ_3541/A4/1394:1405,
1/A4/1454:1465		No text annotation
IL_6GZZ_3551/A4/1413:1420,
1/A4/1440:1446		No text annotation
IL_6GZZ_3561/A4/1422:1428,
1/A4/1435:1438		No text annotation
IL_6GZZ_2191/B2/72:81,
1/B2/100:109		No text annotation
IL_6GZZ_3061/B2/72:88,
1/B2/93:109		No text annotation

Problematic loops

#loop idProblemSequence
IL_6GZZ_002No text annotation
IL_6GZZ_307Kink-turn
IL_6GZZ_003No text annotation
IL_6GZZ_004No text annotation
IL_6GZZ_005Single stack bend
IL_6GZZ_220No text annotation
IL_6GZZ_006No text annotation
IL_6GZZ_012No text annotation
IL_6GZZ_309Single stack bend
IL_6GZZ_221No text annotation
IL_6GZZ_015No text annotation
IL_6GZZ_017No text annotation
IL_6GZZ_222No text annotation
IL_6GZZ_020Single bulged G
IL_6GZZ_022No text annotation
IL_6GZZ_027Single bulged U
IL_6GZZ_028Single stack bend
IL_6GZZ_031Isolated non-canonical cWW pair
IL_6GZZ_225No text annotation
IL_6GZZ_034Single bulged A
IL_6GZZ_226No text annotation
IL_6GZZ_036Tandem non-canonical cWW pairs
IL_6GZZ_038No text annotation
IL_6GZZ_040Isolated tWW turn
IL_6GZZ_041No text annotation
IL_6GZZ_228No text annotation
IL_6GZZ_043No text annotation
IL_6GZZ_044No text annotation
IL_6GZZ_229No text annotation
IL_6GZZ_049No text annotation
IL_6GZZ_230No text annotation
IL_6GZZ_052No text annotation
IL_6GZZ_053UAA/GAN with extra stack
IL_6GZZ_054No text annotation
IL_6GZZ_231No text annotation
IL_6GZZ_063No text annotation
IL_6GZZ_235No text annotation
IL_6GZZ_066Other IL
IL_6GZZ_236No text annotation
IL_6GZZ_237C-loop with extra cWW pair
IL_6GZZ_068No text annotation
IL_6GZZ_069No text annotation
IL_6GZZ_238No text annotation
IL_6GZZ_239No text annotation
IL_6GZZ_072No text annotation
IL_6GZZ_073Single stack bend
IL_6GZZ_240No text annotation
IL_6GZZ_078Kink-turn related
IL_6GZZ_322Kink-turn
IL_6GZZ_079No text annotation
IL_6GZZ_243No text annotation
IL_6GZZ_080Single stack bend
IL_6GZZ_081No text annotation
IL_6GZZ_246No text annotation
IL_6GZZ_088No text annotation
IL_6GZZ_247No text annotation
IL_6GZZ_093No text annotation
IL_6GZZ_249No text annotation
IL_6GZZ_095Single bulged G
IL_6GZZ_098Single bulged C
IL_6GZZ_102Single stack bend
IL_6GZZ_105Isolated non-canonical cWW pair
IL_6GZZ_109No text annotation
IL_6GZZ_250No text annotation
IL_6GZZ_111Single bulged A
IL_6GZZ_251No text annotation
IL_6GZZ_112Tandem non-canonical cWW pairs
IL_6GZZ_255No text annotation
IL_6GZZ_114No text annotation
IL_6GZZ_116No text annotation
IL_6GZZ_117No text annotation
IL_6GZZ_329No text annotation
IL_6GZZ_257No text annotation
IL_6GZZ_122No text annotation
IL_6GZZ_125No text annotation
IL_6GZZ_131Tandem non-canonical cWW pairs with near WC pairs
IL_6GZZ_260No text annotation
IL_6GZZ_261No text annotation
IL_6GZZ_262No text annotation
IL_6GZZ_136No text annotation
IL_6GZZ_264No text annotation
IL_6GZZ_138No text annotation
IL_6GZZ_142No text annotation
IL_6GZZ_265No text annotation
IL_6GZZ_143Other IL
IL_6GZZ_266No text annotation
IL_6GZZ_145Sarcin-Ricin target in LSU H95; G-bulge
IL_6GZZ_146No text annotation
IL_6GZZ_147No text annotation
IL_6GZZ_267No text annotation
IL_6GZZ_268No text annotation
IL_6GZZ_149No text annotation
IL_6GZZ_150No text annotation
IL_6GZZ_269No text annotation
IL_6GZZ_151No text annotation
IL_6GZZ_155No text annotation
IL_6GZZ_157No text annotation
IL_6GZZ_158Tandem non-canonical cWW pairs
IL_6GZZ_341Multiple bulged bases
IL_6GZZ_272Multiple bulged bases
IL_6GZZ_159Isolated non-canonical cWW pair
IL_6GZZ_273No text annotation
IL_6GZZ_342No text annotation
IL_6GZZ_274Isolated non-canonical cWW pair
IL_6GZZ_275No text annotation
IL_6GZZ_163C-loop
IL_6GZZ_276C-loop with extra cWW pair
IL_6GZZ_164Single bulged G
IL_6GZZ_165No text annotation
IL_6GZZ_277No text annotation
IL_6GZZ_278No text annotation
IL_6GZZ_280No text annotation
IL_6GZZ_282No text annotation
IL_6GZZ_172tSH-tHW-tHH-tHS
IL_6GZZ_173Major groove platform; stack outside cWW
IL_6GZZ_175Other IL
IL_6GZZ_345tSH-tHW-tHS
IL_6GZZ_176tSH-tHW-tHS-cWW
IL_6GZZ_285No text annotation
IL_6GZZ_180Single bulged U
IL_6GZZ_181Isolated non-canonical cWW pair
IL_6GZZ_287No text annotation
IL_6GZZ_182No text annotation
IL_6GZZ_288No text annotation
IL_6GZZ_188Triple non-canonical cWW pairs
IL_6GZZ_289No text annotation
IL_6GZZ_290No text annotation
IL_6GZZ_190Tandem non-canonical cWW pairs
IL_6GZZ_192Tandem non-canonical cWW pairs
IL_6GZZ_291No text annotation
IL_6GZZ_349No text annotation
IL_6GZZ_195Isolated non-canonical cWW pair
IL_6GZZ_197C-loop with extra cWW pair
IL_6GZZ_293No text annotation
IL_6GZZ_350No text annotation
IL_6GZZ_294No text annotation
IL_6GZZ_202No text annotation
IL_6GZZ_295No text annotation
IL_6GZZ_352No text annotation
IL_6GZZ_296No text annotation
IL_6GZZ_203Major groove platform; stack outside cWW
IL_6GZZ_298No text annotation
IL_6GZZ_300tSH-tHW-tHS-cWW
IL_6GZZ_301No text annotation
IL_6GZZ_211No text annotation
IL_6GZZ_212Single bulged U
IL_6GZZ_213No text annotation
IL_6GZZ_303No text annotation
IL_6GZZ_216No text annotation
IL_6GZZ_304No text annotation
IL_6GZZ_305Isolated cWH basepair
IL_6GZZ_217No text annotation
IL_6GZZ_218No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_6GZZ_0571/A1/24:31,
1/A1/502:513,
1/A1/523:543		No text annotation
J3_6GZZ_0581/A1/32:38,
1/A1/469:489,
1/A1/496:501		No text annotation
J3_6GZZ_0301/A1/54:56,
1/A1/69:76,
1/A1/107:113		No text annotation
J3_6GZZ_0021/A1/259:263,
1/A1/283:291,
1/A1/396:398		No text annotation
homologous
J3_4WF9_014
NA
J3_6GZZ_0311/A1/322:326,
1/A1/341:350,
1/A1/362:366		No text annotation
homologous
J3_9DFE_006
J3_77124.1
J3_6GZZ_0031/A1/730:738,
1/A1/822:824,
1/A1/840:845		No text annotation
J3_6GZZ_0591/A1/747:756,
1/A1/773:785,
1/A1/809:812		No text annotation
J3_6GZZ_0041/A1/1346:1354,
1/A1/1670:1676,
1/A1/1687:1691		No text annotation
J3_6GZZ_0331/A1/1354:1357,
1/A1/1653:1660,
1/A1/1668:1670		No text annotation
J3_6GZZ_0601/A1/1358:1362,
1/A1/1386:1393,
1/A1/1649:1652		No text annotation
J3_6GZZ_0611/A1/1459:1477,
1/A1/1613:1614,
1/A1/1617:1639		No text annotation
J3_6GZZ_0621/A1/1492:1494,
1/A1/1515:1517,
1/A1/1572:1596		No text annotation
J3_6GZZ_0631/A1/1803:1825,
1/A1/1860:1863,
1/A1/1999:2006		No text annotation
J3_6GZZ_0061/A1/2113:2117,
1/A1/2220:2224,
1/A1/2237:2244		No text annotation
J3_6GZZ_0071/A1/2531:2534,
1/A1/2559:2561,
1/A1/2575:2581		No text annotation
J3_6GZZ_0081/A1/2826:2828,
1/A1/2842:2848,
1/A1/2894:2898		No text annotation
J3_6GZZ_0391/A2/24:31,
1/A2/502:513,
1/A2/522:543		No text annotation
J3_6GZZ_0401/A2/31:35,
1/A2/473:489,
1/A2/496:502		No text annotation
homologous
J3_4WF9_012
J3_07616.1
J3_6GZZ_0091/A2/54:57,
1/A2/68:76,
1/A2/107:113		No text annotation
J3_6GZZ_0101/A2/732:740,
1/A2/820:827,
1/A2/835:843		No text annotation
J3_6GZZ_0641/A2/747:756,
1/A2/773:785,
1/A2/809:812		No text annotation
J3_6GZZ_0111/A2/1346:1352,
1/A2/1672:1676,
1/A2/1687:1691		No text annotation
J3_6GZZ_0121/A2/1354:1357,
1/A2/1653:1659,
1/A2/1668:1670		No text annotation
homologous
J3_5J7L_042
NA
J3_6GZZ_0421/A2/1358:1362,
1/A2/1386:1393,
1/A2/1649:1652		No text annotation
J3_6GZZ_0651/A2/1469:1477,
1/A2/1613:1614,
1/A2/1617:1626		No text annotation
J3_6GZZ_0661/A2/1803:1825,
1/A2/1860:1863,
1/A2/1999:2006		No text annotation
J3_6GZZ_0141/A2/1865:1868,
1/A2/1929:1957,
1/A2/1991:1997		No text annotation
J3_6GZZ_0671/A2/1866:1868,
1/A2/1929:1969,
1/A2/1985:1996		No text annotation
J3_6GZZ_0151/A2/2113:2117,
1/A2/2220:2224,
1/A2/2237:2244		No text annotation
J3_6GZZ_0471/A2/2344:2370,
1/A2/2376:2386,
1/A2/2395:2399		No text annotation
J3_6GZZ_0161/A2/2531:2534,
1/A2/2559:2563,
1/A2/2573:2581		No text annotation
J3_6GZZ_0171/A2/2826:2828,
1/A2/2842:2848,
1/A2/2894:2898		No text annotation
J3_6GZZ_0491/A3/46:53,
1/A3/353:365,
1/A3/386:390		No text annotation
J3_6GZZ_0191/A3/569:571,
1/A3/634:637,
1/A3/737:738		No text annotation
geometric
J3_4LFB_011
J3_01633.1
J3_6GZZ_0501/A3/569:571,
1/A3/634:638,
1/A3/734:738		No text annotation
homologous
J3_4LFB_015
J3_17385.5
J3_6GZZ_0201/A3/808:812,
1/A3/834:838,
1/A3/845:852		No text annotation
J3_6GZZ_0681/A3/908:916,
1/A3/1325:1331,
1/A3/1354:1368		No text annotation
J3_6GZZ_0691/A3/1045:1054,
1/A3/1085:1143,
1/A3/1156:1174		No text annotation
J3_6GZZ_0211/A3/1055:1056,
1/A3/1065:1069,
1/A3/1080:1084		No text annotation
homologous
J3_5J7L_009
NA
J3_6GZZ_0221/A4/46:47,
1/A4/356:365,
1/A4/386:390		No text annotation
J3_6GZZ_0231/A4/133:139,
1/A4/171:177,
1/A4/200:219		No text annotation
J3_6GZZ_0241/A4/569:571,
1/A4/634:637,
1/A4/737:738		No text annotation
geometric
J3_5J7L_002
NA
J3_6GZZ_0531/A4/569:571,
1/A4/634:638,
1/A4/734:738		No text annotation
homologous
J3_4LFB_015
J3_17385.5
J3_6GZZ_0251/A4/808:813,
1/A4/833:838,
1/A4/845:852		No text annotation
J3_6GZZ_0701/A4/908:916,
1/A4/1325:1331,
1/A4/1354:1368		No text annotation
J3_6GZZ_0261/A4/1055:1056,
1/A4/1065:1069,
1/A4/1080:1084		No text annotation
homologous
J3_5J7L_009
NA
J3_6GZZ_0551/B1/13:18,
1/B1/70:71,
1/B1/110:112		No text annotation
homologous
J3_9DFE_020
J3_26985.1
J4_6GZZ_0011/A1/626:636,
1/A1/644:655,
1/A1/662:666,
1/A1/676:705		No text annotation
J4_6GZZ_0021/A1/1395:1405,
1/A1/1422:1433,
1/A1/1450:1457,
1/A1/1641:1647		No text annotation
J4_6GZZ_0201/A1/1866:1868,
1/A1/1929:1933,
1/A1/1945:1969,
1/A1/1985:1996		No text annotation
J4_6GZZ_0041/A1/2657:2663,
1/A1/2685:2690,
1/A1/2746:2751,
1/A1/2783:2786		No text annotation
J4_6GZZ_0211/A2/318:326,
1/A2/341:344,
1/A2/348:350,
1/A2/362:372		No text annotation
J4_6GZZ_0221/A2/624:629,
1/A2/651:655,
1/A2/662:666,
1/A2/676:707		No text annotation
J4_6GZZ_0071/A2/1396:1405,
1/A2/1422:1433,
1/A2/1450:1457,
1/A2/1641:1646		No text annotation
J4_6GZZ_0231/A2/2657:2663,
1/A2/2685:2690,
1/A2/2746:2750,
1/A2/2784:2786		No text annotation
J4_6GZZ_0091/A3/58:61,
1/A3/99:108,
1/A3/307:311,
1/A3/332:349		No text annotation
J4_6GZZ_0101/A3/108:120,
1/A3/229:236,
1/A3/280:285,
1/A3/305:307		No text annotation
J4_6GZZ_0241/A3/558:560,
1/A3/747:752,
1/A3/793:805,
1/A3/855:857		No text annotation
J4_6GZZ_0131/A3/916:925,
1/A3/1214:1223,
1/A3/1276:1284,
1/A3/1315:1325		No text annotation
J4_6GZZ_0141/A3/930:939,
1/A3/950:988,
1/A3/997:1042,
1/A3/1178:1209		No text annotation
J4_6GZZ_0151/A4/108:120,
1/A4/229:236,
1/A4/280:285,
1/A4/305:307		No text annotation
J4_6GZZ_0251/A4/558:560,
1/A4/747:752,
1/A4/793:805,
1/A4/855:857		No text annotation
J4_6GZZ_0171/A4/916:925,
1/A4/1214:1222,
1/A4/1277:1291,
1/A4/1308:1325		No text annotation
J4_6GZZ_0181/A4/930:939,
1/A4/950:988,
1/A4/997:1043,
1/A4/1176:1209		No text annotation
J4_6GZZ_0261/A4/1043:1050,
1/A4/1089:1100,
1/A4/1137:1143,
1/A4/1156:1176		No text annotation
J5_6GZZ_0081/A1/1712:1732,
1/A1/1754:1757,
1/A1/1783:1785,
1/A1/1789:1797,
1/A1/2012:2021		No text annotation
J5_6GZZ_0091/A1/2074:2090,
1/A1/2458:2470,
1/A1/2509:2527,
1/A1/2585:2602,
1/A1/2620:2632		No text annotation
J5_6GZZ_0101/A2/1712:1732,
1/A2/1754:1757,
1/A2/1783:1785,
1/A2/1789:1797,
1/A2/2012:2021		No text annotation
J5_6GZZ_0111/A2/2074:2089,
1/A2/2459:2470,
1/A2/2509:2527,
1/A2/2585:2602,
1/A2/2620:2632		No text annotation
J5_6GZZ_0071/A4/47:61,
1/A4/99:108,
1/A4/307:311,
1/A4/332:334,
1/A4/345:356		No text annotation
J7_6GZZ_0051/A1/866:871,
1/A1/884:885,
1/A1/990:993,
1/A1/1018:1024,
1/A1/1035:1041,
1/A1/1209:1216,
1/A1/1228:1237		No text annotation
J7_6GZZ_0021/A1/2091:2109,
1/A1/2249:2260,
1/A1/2272:2273,
1/A1/2295:2297,
1/A1/2339:2340,
1/A1/2403:2409,
1/A1/2435:2457		No text annotation
J7_6GZZ_0061/A2/864:871,
1/A2/884:885,
1/A2/990:993,
1/A2/1018:1024,
1/A2/1035:1040,
1/A2/1210:1217,
1/A2/1227:1239		No text annotation
J7_6GZZ_0071/A2/2098:2101,
1/A2/2257:2260,
1/A2/2272:2273,
1/A2/2295:2297,
1/A2/2339:2340,
1/A2/2403:2409,
1/A2/2435:2449		No text annotation
J10_6GZZ_0011/A1/558:562,
1/A1/584:591,
1/A1/600:624,
1/A1/708:728,
1/A1/847:861,
1/A1/1242:1243,
1/A1/1298:1324,
1/A1/1342:1343,
1/A1/1694:1697,
1/A1/2033:2042		No text annotation
J10_6GZZ_0021/A2/558:560,
1/A2/585:591,
1/A2/600:614,
1/A2/717:720,
1/A2/858:861,
1/A2/1242:1248,
1/A2/1293:1324,
1/A2/1342:1343,
1/A2/1694:1699,
1/A2/2031:2042		No text annotation
J12_6GZZ_0031/A1/39:53,
1/A1/114:120,
1/A1/127:130,
1/A1/147:152,
1/A1/164:175,
1/A1/201:214,
1/A1/221:229,
1/A1/248:266,
1/A1/280:295,
1/A1/391:406,
1/A1/425:436,
1/A1/448:468		No text annotation
J12_6GZZ_0041/A2/39:53,
1/A2/114:120,
1/A2/127:130,
1/A2/147:151,
1/A2/165:175,
1/A2/201:214,
1/A2/221:229,
1/A2/248:266,
1/A2/280:290,
1/A2/397:404,
1/A2/427:435,
1/A2/449:468		No text annotation

Problematic loops

#loop idProblemSequence
J3_6GZZ_028No text annotation
J3_6GZZ_029No text annotation
J3_6GZZ_001No text annotation
J3_6GZZ_032No text annotation
J3_6GZZ_034No text annotation
J3_6GZZ_035No text annotation
J3_6GZZ_005No text annotation
J3_6GZZ_036No text annotation
J3_6GZZ_037No text annotation
J3_6GZZ_038No text annotation
J3_6GZZ_041No text annotation
J3_6GZZ_043No text annotation
J3_6GZZ_044No text annotation
J3_6GZZ_013No text annotation
J3_6GZZ_045No text annotation
J3_6GZZ_046No text annotation
J3_6GZZ_048No text annotation
J3_6GZZ_018No text annotation
J3_6GZZ_051No text annotation
J3_6GZZ_052No text annotation
J3_6GZZ_054No text annotation
J3_6GZZ_027No text annotation
J3_6GZZ_056No text annotation
J4_6GZZ_003No text annotation
J4_6GZZ_005No text annotation
J4_6GZZ_006No text annotation
J4_6GZZ_008No text annotation
J4_6GZZ_011No text annotation
J4_6GZZ_012No text annotation
J4_6GZZ_016No text annotation
J4_6GZZ_019No text annotation
J5_6GZZ_001No text annotation
J5_6GZZ_002No text annotation
J5_6GZZ_003No text annotation
J5_6GZZ_004No text annotation
J5_6GZZ_012No text annotation
J5_6GZZ_005No text annotation
J5_6GZZ_006No text annotation
J7_6GZZ_001No text annotation
J7_6GZZ_003No text annotation
J7_6GZZ_004No text annotation
J12_6GZZ_001No text annotation
J12_6GZZ_002No text annotation

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