HL_6GZZ_025
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GGCCCACCAGCC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZZ_025 not in the Motif Atlas
- Geometric match to HL_5XUZ_001
- Geometric discrepancy: 0.3301
- The information below is about HL_5XUZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.3
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 5
Unit IDs
6GZZ|1|A1|G|931
6GZZ|1|A1|G|932
6GZZ|1|A1|C|933
6GZZ|1|A1|C|934
6GZZ|1|A1|C|935
6GZZ|1|A1|A|936
6GZZ|1|A1|C|937
6GZZ|1|A1|C|938
6GZZ|1|A1|A|939
6GZZ|1|A1|G|940
6GZZ|1|A1|C|941
6GZZ|1|A1|C|942
Current chains
- Chain A1
- 23S ribosomal RNA
Nearby chains
- Chain M3
- 30S ribosomal protein S13
Coloring options: