HL_6GZZ_027

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6GZZ_027 not in the Motif Atlas

Homologous match to HL_7RQB_028

Geometric discrepancy: 0.3076

The information below is about HL_7RQB_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

6GZZ|1|A1|G|1026
6GZZ|1|A1|G|1027
6GZZ|1|A1|A|1028
6GZZ|1|A1|A|1029
6GZZ|1|A1|C|1030
6GZZ|1|A1|A|1031
6GZZ|1|A1|A|1032
6GZZ|1|A1|C|1033

Current chains

Chain A1

23S ribosomal RNA

Nearby chains