HL_6GZZ_031

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GAGGGUGAGAAUCCCUC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|G|1325
6GZZ|1|A1|A|1326
6GZZ|1|A1|G|1327
6GZZ|1|A1|G|1328
6GZZ|1|A1|G|1329
6GZZ|1|A1|U|1330
6GZZ|1|A1|G|1331
6GZZ|1|A1|A|1332
6GZZ|1|A1|G|1333
6GZZ|1|A1|A|1334
6GZZ|1|A1|A|1335
6GZZ|1|A1|U|1336
6GZZ|1|A1|C|1337
6GZZ|1|A1|C|1338
6GZZ|1|A1|C|1339
6GZZ|1|A1|U|1340
6GZZ|1|A1|C|1341

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain M1

50S ribosomal protein L17

Chain R1

50S ribosomal protein L22