HL_6GZZ_053

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CGAGGCCUGCAAGCCGAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|2364
6GZZ|1|A1|G|2365
6GZZ|1|A1|A|2366
6GZZ|1|A1|G|2367
6GZZ|1|A1|G|2368
6GZZ|1|A1|C|2369
6GZZ|1|A1|C|2370
6GZZ|1|A1|U|2371
6GZZ|1|A1|G|2372
6GZZ|1|A1|C|2373
6GZZ|1|A1|A|2374
6GZZ|1|A1|A|2375
6GZZ|1|A1|G|2376
6GZZ|1|A1|C|2377
6GZZ|1|A1|C|2378
6GZZ|1|A1|G|2379
6GZZ|1|A1|A|2380
6GZZ|1|A1|G|2381

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain K1

50S ribosomal protein L15

Chain V1

50S ribosomal protein L27

Chain d1

50S ribosomal protein L35