HL_6GZZ_055

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GUCCCGUGUGGAAGGGC

Length

17 nucleotides

Bulged bases

6GZZ|1|A1|U|2420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|G|2414
6GZZ|1|A1|U|2415
6GZZ|1|A1|C|2416
6GZZ|1|A1|C|2417
6GZZ|1|A1|C|2418
6GZZ|1|A1|G|2419
6GZZ|1|A1|U|2420
6GZZ|1|A1|G|2421
6GZZ|1|A1|U|2422
6GZZ|1|A1|G|2423
6GZZ|1|A1|G|2424
6GZZ|1|A1|A|2425
6GZZ|1|A1|A|2426
6GZZ|1|A1|G|2427
6GZZ|1|A1|G|2428
6GZZ|1|A1|G|2429
6GZZ|1|A1|C|2430

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain K1

50S ribosomal protein L15

Chain W1

50S ribosomal protein L28

Chain b1

50S ribosomal protein L33

Chain d1

50S ribosomal protein L35