HL_6GZZ_056

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CGUCCACAG

Length

9 nucleotides

Bulged bases

6GZZ|1|A1|A|2490, 6GZZ|1|A1|C|2491

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|2485
6GZZ|1|A1|G|2486
6GZZ|1|A1|U|2487
6GZZ|1|A1|C|2488
6GZZ|1|A1|C|2489
6GZZ|1|A1|A|2490
6GZZ|1|A1|C|2491
6GZZ|1|A1|A|2492
6GZZ|1|A1|G|2493

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain L1

50S ribosomal protein L16

Chain e1

50S ribosomal protein L36