HL_6GZZ_057

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UGGGGCUGAAGAAGGUCCCAAG

Length

22 nucleotides

Bulged bases

6GZZ|1|A1|G|2543, 6GZZ|1|A1|A|2545, 6GZZ|1|A1|A|2556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|U|2536
6GZZ|1|A1|G|2537
6GZZ|1|A1|G|2538
6GZZ|1|A1|G|2539
6GZZ|1|A1|G|2540
6GZZ|1|A1|C|2541
6GZZ|1|A1|U|2542
6GZZ|1|A1|G|2543
6GZZ|1|A1|A|2544
6GZZ|1|A1|A|2545
6GZZ|1|A1|G|2546
6GZZ|1|A1|A|2547
6GZZ|1|A1|A|2548
6GZZ|1|A1|G|2549
6GZZ|1|A1|G|2550
6GZZ|1|A1|U|2551
6GZZ|1|A1|C|2552
6GZZ|1|A1|C|2553
6GZZ|1|A1|C|2554
6GZZ|1|A1|A|2555
6GZZ|1|A1|A|2556
6GZZ|1|A1|G|2557

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain G1

50S ribosomal protein L6

Chain I1

50S ribosomal protein L13

Chain e1

50S ribosomal protein L36