HL_6GZZ_070

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGAACUGAAACAUCUCAGUAC

Length

21 nucleotides

Bulged bases

6GZZ|1|A2|A|186, 6GZZ|1|A2|A|189

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|G|178
6GZZ|1|A2|G|179
6GZZ|1|A2|A|180
6GZZ|1|A2|A|181
6GZZ|1|A2|C|182
6GZZ|1|A2|U|183
6GZZ|1|A2|G|184
6GZZ|1|A2|A|185
6GZZ|1|A2|A|186
6GZZ|1|A2|A|187
6GZZ|1|A2|C|188
6GZZ|1|A2|A|189
6GZZ|1|A2|U|190
6GZZ|1|A2|C|191
6GZZ|1|A2|U|192
6GZZ|1|A2|C|193
6GZZ|1|A2|A|194
6GZZ|1|A2|G|195
6GZZ|1|A2|U|196
6GZZ|1|A2|A|197
6GZZ|1|A2|C|198

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain K2

50S ribosomal protein L15

Chain W2

50S ribosomal protein L28

Chain c2

50S ribosomal protein L34

Chain d2

50S ribosomal protein L35