HL_6GZZ_098

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UGAAGCCGAAAGGCGUAG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|U|1405
6GZZ|1|A2|G|1406
6GZZ|1|A2|A|1407
6GZZ|1|A2|A|1408
6GZZ|1|A2|G|1409
6GZZ|1|A2|C|1410
6GZZ|1|A2|C|1411
6GZZ|1|A2|G|1412
6GZZ|1|A2|A|1413
6GZZ|1|A2|A|1414
6GZZ|1|A2|A|1415
6GZZ|1|A2|G|1416
6GZZ|1|A2|G|1417
6GZZ|1|A2|C|1418
6GZZ|1|A2|G|1419
6GZZ|1|A2|U|1420
6GZZ|1|A2|A|1421
6GZZ|1|A2|G|1422

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain C2

50S ribosomal protein L2

Chain W2

50S ribosomal protein L28

Chain c2

50S ribosomal protein L34