HL_6GZZ_116

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UCCUAAAAGGUAACGGA

Length

17 nucleotides

Bulged bases

6GZZ|1|A2|A|2282, 6GZZ|1|A2|C|2289

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|U|2276
6GZZ|1|A2|C|2277
6GZZ|1|A2|C|2278
6GZZ|1|A2|U|2279
6GZZ|1|A2|A|2280
6GZZ|1|A2|A|2281
6GZZ|1|A2|A|2282
6GZZ|1|A2|A|2283
6GZZ|1|A2|G|2284
6GZZ|1|A2|G|2285
6GZZ|1|A2|U|2286
6GZZ|1|A2|A|2287
6GZZ|1|A2|A|2288
6GZZ|1|A2|C|2289
6GZZ|1|A2|G|2290
6GZZ|1|A2|G|2291
6GZZ|1|A2|A|2292

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L16

Chain V2

50S ribosomal protein L27