HL_6GZZ_121

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CCCGAGCGUCCACAGCGGCGG

Length

21 nucleotides

Bulged bases

6GZZ|1|A2|C|2491

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A2|C|2479
6GZZ|1|A2|C|2480
6GZZ|1|A2|C|2481
6GZZ|1|A2|G|2482
6GZZ|1|A2|A|2483
6GZZ|1|A2|G|2484
6GZZ|1|A2|C|2485
6GZZ|1|A2|G|2486
6GZZ|1|A2|U|2487
6GZZ|1|A2|C|2488
6GZZ|1|A2|C|2489
6GZZ|1|A2|A|2490
6GZZ|1|A2|C|2491
6GZZ|1|A2|A|2492
6GZZ|1|A2|G|2493
6GZZ|1|A2|C|2494
6GZZ|1|A2|G|2495
6GZZ|1|A2|G|2496
6GZZ|1|A2|C|2497
6GZZ|1|A2|G|2498
6GZZ|1|A2|G|2499

Current chains

Chain A2

23S ribosomal RNA

Nearby chains

Chain L2

50S ribosomal protein L16

Chain e2

50S ribosomal protein L36