HL_6GZZ_156

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CGGAUCAGCCAUGCCG

Length

16 nucleotides

Bulged bases

6GZZ|1|A3|C|1344, 6GZZ|1|A3|U|1346

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A3|C|1335
6GZZ|1|A3|G|1336
6GZZ|1|A3|G|1337
6GZZ|1|A3|A|1338
6GZZ|1|A3|U|1339
6GZZ|1|A3|C|1340
6GZZ|1|A3|A|1341
6GZZ|1|A3|G|1342
6GZZ|1|A3|C|1343
6GZZ|1|A3|C|1344
6GZZ|1|A3|A|1345
6GZZ|1|A3|U|1346
6GZZ|1|A3|G|1347
6GZZ|1|A3|C|1348
6GZZ|1|A3|C|1349
6GZZ|1|A3|G|1350

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain C3

30S ribosomal protein S3

Chain I3

30S ribosomal protein S9

Chain J3

30S ribosomal protein S10

Chain M3

30S ribosomal protein S13

Chain N3

30S ribosomal protein S14 type Z

Chain U3

30S ribosomal protein Thx