HL_6GZZ_191
3D structure
- PDB id
- 6GZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- T. thermophilus hibernating 100S ribosome (amc)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.13 Å
Loop
- Sequence
- GGCGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6GZZ_191 not in the Motif Atlas
- Homologous match to HL_7A0S_070
- Geometric discrepancy: 0.2483
- The information below is about HL_7A0S_070
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
6GZZ|1|B2|G|88
6GZZ|1|B2|G|89
6GZZ|1|B2|C|90
6GZZ|1|B2|G|91
6GZZ|1|B2|A|92
6GZZ|1|B2|C|93
Current chains
- Chain B2
- 5S ribosomal RNA
Nearby chains
- Chain A2
- Large subunit ribosomal RNA; LSU rRNA
- Chain L2
- 50S ribosomal protein L16
- Chain U2
- 50S ribosomal protein L25
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