HL_6GZZ_195

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CGGCCCCGCAAGGGGUUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|564
6GZZ|1|A1|G|565
6GZZ|1|A1|G|566
6GZZ|1|A1|C|567
6GZZ|1|A1|C|568
6GZZ|1|A1|C|569
6GZZ|1|A1|C|570
6GZZ|1|A1|G|571
6GZZ|1|A1|C|572
6GZZ|1|A1|A|573
6GZZ|1|A1|A|574
6GZZ|1|A1|G|575
6GZZ|1|A1|G|576
6GZZ|1|A1|G|577
6GZZ|1|A1|G|578
6GZZ|1|A1|U|579
6GZZ|1|A1|U|580
6GZZ|1|A1|G|581

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain I1

50S ribosomal protein L13

Chain P1

50S ribosomal protein L20

Chain Q1

50S ribosomal protein L21