HL_6GZZ_197

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GAGCGAUAACGUCC

Length

14 nucleotides

Bulged bases

6GZZ|1|A1|U|1005, 6GZZ|1|A1|A|1007, 6GZZ|1|A1|C|1008

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|G|999
6GZZ|1|A1|A|1000
6GZZ|1|A1|G|1001
6GZZ|1|A1|C|1002
6GZZ|1|A1|G|1003
6GZZ|1|A1|A|1004
6GZZ|1|A1|U|1005
6GZZ|1|A1|A|1006
6GZZ|1|A1|A|1007
6GZZ|1|A1|C|1008
6GZZ|1|A1|G|1009
6GZZ|1|A1|U|1010
6GZZ|1|A1|C|1011
6GZZ|1|A1|C|1012

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain B1

5S ribosomal RNA; 5S rRNA

Chain L1

50S ribosomal protein L16