HL_6GZZ_198

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

CUACGCAAUGGUCGUCAGCGUAG

Length

23 nucleotides

Bulged bases

6GZZ|1|A1|G|1373, 6GZZ|1|A1|U|1377, 6GZZ|1|A1|C|1378, 6GZZ|1|A1|G|1380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|C|1363
6GZZ|1|A1|U|1364
6GZZ|1|A1|A|1365
6GZZ|1|A1|C|1366
6GZZ|1|A1|G|1367
6GZZ|1|A1|C|1368
6GZZ|1|A1|A|1369
6GZZ|1|A1|A|1370
6GZZ|1|A1|U|1371
6GZZ|1|A1|G|1372
6GZZ|1|A1|G|1373
6GZZ|1|A1|U|1374
6GZZ|1|A1|C|1375
6GZZ|1|A1|G|1376
6GZZ|1|A1|U|1377
6GZZ|1|A1|C|1378
6GZZ|1|A1|A|1379
6GZZ|1|A1|G|1380
6GZZ|1|A1|C|1381
6GZZ|1|A1|G|1382
6GZZ|1|A1|U|1383
6GZZ|1|A1|A|1384
6GZZ|1|A1|G|1385

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain M1

50S ribosomal protein L17

Chain R1

50S ribosomal protein L22

Chain S1

50S ribosomal protein L23