HL_6GZZ_200

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

UCGGGUAAGUUCCGA

Length

15 nucleotides

Bulged bases

6GZZ|1|A1|U|1975, 6GZZ|1|A1|U|1979

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A1|U|1970
6GZZ|1|A1|C|1971
6GZZ|1|A1|G|1972
6GZZ|1|A1|G|1973
6GZZ|1|A1|G|1974
6GZZ|1|A1|U|1975
6GZZ|1|A1|A|1976
6GZZ|1|A1|A|1977
6GZZ|1|A1|G|1978
6GZZ|1|A1|U|1979
6GZZ|1|A1|U|1980
6GZZ|1|A1|C|1981
6GZZ|1|A1|C|1982
6GZZ|1|A1|G|1983
6GZZ|1|A1|A|1984

Current chains

Chain A1

23S ribosomal RNA

Nearby chains

Chain A3

Small subunit ribosomal RNA; SSU rRNA

Chain J1

50S ribosomal protein L14