HL_6GZZ_219

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGUCUGAGAGGAUGGCC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A3|G|287
6GZZ|1|A3|G|288
6GZZ|1|A3|U|289
6GZZ|1|A3|C|290
6GZZ|1|A3|U|291
6GZZ|1|A3|G|292
6GZZ|1|A3|A|293
6GZZ|1|A3|G|294
6GZZ|1|A3|A|295
6GZZ|1|A3|G|296
6GZZ|1|A3|G|297
6GZZ|1|A3|A|298
6GZZ|1|A3|U|299
6GZZ|1|A3|G|300
6GZZ|1|A3|G|301
6GZZ|1|A3|C|302
6GZZ|1|A3|C|303

Current chains

Chain A3

16S ribosomal RNA

Nearby chains

Chain D3

30S ribosomal protein S4

Chain E3

30S ribosomal protein S5

Chain L3

30S ribosomal protein S12

Chain P3

30S ribosomal protein S16

Chain Q3

30S ribosomal protein S17