HL_6GZZ_228

3D structure

PDB id

6GZZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

T. thermophilus hibernating 100S ribosome (amc)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.13 Å

Loop

Sequence

GGGGUAAUGGCCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6GZZ|1|A4|G|252
6GZZ|1|A4|G|253
6GZZ|1|A4|G|254
6GZZ|1|A4|G|255
6GZZ|1|A4|U|256
6GZZ|1|A4|A|257
6GZZ|1|A4|A|258
6GZZ|1|A4|U|259
6GZZ|1|A4|G|260
6GZZ|1|A4|G|261
6GZZ|1|A4|C|262
6GZZ|1|A4|C|263
6GZZ|1|A4|C|264

Current chains

Chain A4

16S ribosomal RNA

Nearby chains

Chain Q4

30S ribosomal protein S17

Chain T4

30S ribosomal protein S20