HL_6H4N_012

3D structure

PDB id

6H4N (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

6H4N|1|A|G|411

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6H4N_012 not in the Motif Atlas

Homologous match to HL_7A0S_014

Geometric discrepancy: 0.1015

The information below is about HL_7A0S_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_96598.3

Basepair signature

cWW

Number of instances in this motif group

16

Unit IDs

6H4N|1|A|G|410
6H4N|1|A|G|411
6H4N|1|A|A|412
6H4N|1|A|C|413
6H4N|1|A|C|414
6H4N|1|A|A|415
6H4N|1|A|U|416
6H4N|1|A|C|417

Current chains

Chain A

23S ribosomal RNA

Nearby chains