HL_6H4N_102
3D structure
- PDB id
- 6H4N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli Ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAGCCGGUAG*G
- Length
- 11 nucleotides
- Bulged bases
- 6H4N|1|w|C|17, 6H4N|1|w|G|18, 6H4N|1|w|G|19, 6H4N|1|w|U|20
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6H4N_102 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.0992
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
6H4N|1|w|C|13
6H4N|1|w|A|14
6H4N|1|w|G|15
6H4N|1|w|C|16
6H4N|1|w|C|17
6H4N|1|w|G|18
6H4N|1|w|G|19
6H4N|1|w|U|20
6H4N|1|w|A|21
6H4N|1|w|G|22
*
6H4N|1|w|G|22
Current chains
- Chain w
- tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
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