HL_6H58_074

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

6H58|1|AA|A|196

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6H58_074 not in the Motif Atlas

Geometric match to HL_7RQB_006

Geometric discrepancy: 0.0954

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

6H58|1|AA|G|194
6H58|1|AA|A|195
6H58|1|AA|A|196
6H58|1|AA|A|197
6H58|1|AA|C|198
6H58|1|AA|A|199
6H58|1|AA|U|200
6H58|1|AA|C|201

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain LL

50S ribosomal protein L15

Chain XX

50S ribosomal protein L28

Chain ww

Transfer RNA; tRNA