6H58 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_6H58_001 | No text annotation | ||
| HL_6H58_002 | No text annotation | ||
| HL_6H58_003 | No text annotation | ||
| HL_6H58_004 | Externally structured | ||
| HL_6H58_005 | No text annotation | ||
| HL_6H58_006 | No text annotation | ||
| HL_6H58_007 | No text annotation | ||
| HL_6H58_008 | No text annotation | ||
| HL_6H58_009 | T-loop with 2 stacked bulged bases | ||
| HL_6H58_010 | T-loop with unstacked turn | ||
| HL_6H58_011 | No text annotation | ||
| HL_6H58_012 | Pseudoknot geometry | ||
| HL_6H58_013 | GNRA | ||
| HL_6H58_014 | GNRA | ||
| HL_6H58_015 | No text annotation | ||
| HL_6H58_016 | T-loop with 2 stacked bulged bases | ||
| HL_6H58_017 | No text annotation | ||
| HL_6H58_018 | GNRA | ||
| HL_6H58_019 | No text annotation | ||
| HL_6H58_020 | GNRA wlth tandem sheared | ||
| HL_6H58_021 | No text annotation | ||
| HL_6H58_022 | UNCG variation | ||
| HL_6H58_023 | No text annotation | ||
| HL_6H58_024 | No text annotation | ||
| HL_6H58_025 | tRNA anticodon loop | ||
| HL_6H58_026 | No text annotation | ||
| HL_6H58_027 | No text annotation | ||
| HL_6H58_028 | No text annotation | ||
| HL_6H58_029 | No text annotation | ||
| HL_6H58_030 | GNRA | ||
| HL_6H58_031 | T-loop with 2 stacked bulged bases | ||
| HL_6H58_032 | Pseudoknot geometry with 3' bulge | ||
| HL_6H58_033 | GNRA | ||
| HL_6H58_034 | No text annotation | ||
| HL_6H58_035 | No text annotation | ||
| HL_6H58_036 | Pseudoknot geometry with 3' bulge | ||
| HL_6H58_037 | UNCG | ||
| HL_6H58_038 | Mini UNCG | ||
| HL_6H58_039 | No text annotation | ||
| HL_6H58_040 | GNRA | ||
| HL_6H58_041 | UNCG | ||
| HL_6H58_042 | No text annotation | ||
| HL_6H58_043 | No text annotation | ||
| HL_6H58_044 | No text annotation | ||
| HL_6H58_045 | GNRA related | ||
| HL_6H58_046 | GNRA variation | ||
| HL_6H58_047 | No text annotation | ||
| HL_6H58_048 | No text annotation | ||
| HL_6H58_049 | No text annotation | ||
| HL_6H58_050 | No text annotation | ||
| HL_6H58_209 | No text annotation | ||
| HL_6H58_051 | No text annotation | ||
| HL_6H58_052 | No text annotation | ||
| HL_6H58_053 | No text annotation | ||
| HL_6H58_054 | No text annotation | ||
| HL_6H58_210 | No text annotation | ||
| HL_6H58_055 | Pseudoknot geometry | ||
| HL_6H58_056 | GNRA | ||
| HL_6H58_057 | GNRA | ||
| HL_6H58_058 | No text annotation | ||
| HL_6H58_059 | No text annotation | ||
| HL_6H58_060 | GNRA variation | ||
| HL_6H58_061 | No text annotation | ||
| HL_6H58_062 | GNRA | ||
| HL_6H58_063 | GNRA | ||
| HL_6H58_064 | Ribsomal LSU H95 | ||
| HL_6H58_065 | No text annotation | ||
| HL_6H58_066 | Mini UNCG | ||
| HL_6H58_067 | No text annotation | ||
| HL_6H58_068 | GNRA | ||
| HL_6H58_069 | Pseudoknot geometry | ||
| HL_6H58_070 | No text annotation | ||
| HL_6H58_071 | No text annotation | ||
| HL_6H58_072 | Externally structured | ||
| HL_6H58_073 | No text annotation | ||
| HL_6H58_074 | No text annotation | ||
| HL_6H58_075 | No text annotation | ||
| HL_6H58_076 | No text annotation | ||
| HL_6H58_077 | T-loop with 2 stacked bulged bases | ||
| HL_6H58_078 | T-loop with unstacked turn | ||
| HL_6H58_079 | No text annotation | ||
| HL_6H58_080 | Pseudoknot geometry | ||
| HL_6H58_081 | GNRA | ||
| HL_6H58_082 | GNRA | ||
| HL_6H58_083 | No text annotation | ||
| HL_6H58_084 | T-loop with 2 stacked bulged bases | ||
| HL_6H58_085 | No text annotation | ||
| HL_6H58_086 | GNRA | ||
| HL_6H58_087 | No text annotation | ||
| HL_6H58_088 | GNRA wlth tandem sheared | ||
| HL_6H58_089 | No text annotation | ||
| HL_6H58_090 | UNCG variation | ||
| HL_6H58_091 | No text annotation | ||
| HL_6H58_092 | No text annotation | ||
| HL_6H58_093 | tRNA anticodon loop | ||
| HL_6H58_094 | No text annotation | ||
| HL_6H58_095 | No text annotation | ||
| HL_6H58_096 | No text annotation | ||
| HL_6H58_097 | No text annotation | ||
| HL_6H58_098 | GNRA | ||
| HL_6H58_099 | T-loop with 2 stacked bulged bases | ||
| HL_6H58_100 | Pseudoknot geometry with 3' bulge | ||
| HL_6H58_101 | GNRA | ||
| HL_6H58_102 | No text annotation | ||
| HL_6H58_103 | No text annotation | ||
| HL_6H58_104 | Pseudoknot geometry with 3' bulge | ||
| HL_6H58_105 | No text annotation | ||
| HL_6H58_106 | Mini UNCG | ||
| HL_6H58_107 | No text annotation | ||
| HL_6H58_108 | GNRA | ||
| HL_6H58_109 | UNCG | ||
| HL_6H58_110 | No text annotation | ||
| HL_6H58_111 | No text annotation | ||
| HL_6H58_112 | No text annotation | ||
| HL_6H58_113 | GNRA related | ||
| HL_6H58_114 | UNCG variation | ||
| HL_6H58_115 | No text annotation | ||
| HL_6H58_116 | No text annotation | ||
| HL_6H58_117 | No text annotation | ||
| HL_6H58_118 | No text annotation | ||
| HL_6H58_211 | No text annotation | ||
| HL_6H58_119 | No text annotation | ||
| HL_6H58_120 | No text annotation | ||
| HL_6H58_121 | No text annotation | ||
| HL_6H58_122 | No text annotation | ||
| HL_6H58_212 | No text annotation | ||
| HL_6H58_123 | Pseudoknot geometry | ||
| HL_6H58_124 | GNRA | ||
| HL_6H58_125 | GNRA | ||
| HL_6H58_126 | No text annotation | ||
| HL_6H58_127 | No text annotation | ||
| HL_6H58_128 | GNRA variation | ||
| HL_6H58_129 | No text annotation | ||
| HL_6H58_130 | GNRA | ||
| HL_6H58_131 | GNRA | ||
| HL_6H58_132 | Ribsomal LSU H95 | ||
| HL_6H58_133 | No text annotation | ||
| HL_6H58_134 | Mini UNCG | ||
| HL_6H58_135 | No text annotation | ||
| HL_6H58_136 | GNRA | ||
| HL_6H58_213 | No text annotation | ||
| HL_6H58_137 | No text annotation | ||
| HL_6H58_138 | Mini UNCG | ||
| HL_6H58_214 | No text annotation | ||
| HL_6H58_139 | No text annotation | ||
| HL_6H58_140 | Mini UNCG | ||
| HL_6H58_141 | No text annotation | ||
| HL_6H58_142 | No text annotation | ||
| HL_6H58_215 | No text annotation | ||
| HL_6H58_143 | GNRA | ||
| HL_6H58_144 | GNRA | ||
| HL_6H58_145 | Mini UNCG | ||
| HL_6H58_146 | GNRA related | ||
| HL_6H58_147 | GNRA | ||
| HL_6H58_148 | No text annotation | ||
| HL_6H58_149 | UNCG | ||
| HL_6H58_150 | GNRA | ||
| HL_6H58_151 | UNCG | ||
| HL_6H58_152 | GNRA wlth extra near cWW | ||
| HL_6H58_153 | No text annotation | ||
| HL_6H58_154 | GNRA-like with tWH | ||
| HL_6H58_155 | No text annotation | ||
| HL_6H58_156 | GNRA | ||
| HL_6H58_157 | No text annotation | ||
| HL_6H58_158 | No text annotation | ||
| HL_6H58_159 | GNRA | ||
| HL_6H58_160 | GNRA | ||
| HL_6H58_161 | No text annotation | ||
| HL_6H58_162 | GNRA | ||
| HL_6H58_163 | GNRA | ||
| HL_6H58_164 | T-loop related | ||
| HL_6H58_165 | No text annotation | ||
| HL_6H58_166 | GNRA | ||
| HL_6H58_167 | GNRA | ||
| HL_6H58_168 | T-loop with 3 stacked bulged bases | ||
| HL_6H58_169 | No text annotation | ||
| HL_6H58_170 | UNCG | ||
| HL_6H58_171 | No text annotation | ||
| HL_6H58_172 | No text annotation | ||
| HL_6H58_173 | No text annotation | ||
| HL_6H58_216 | No text annotation | ||
| HL_6H58_174 | GNRA | ||
| HL_6H58_175 | GNRA | ||
| HL_6H58_176 | Mini UNCG | ||
| HL_6H58_177 | GNRA related | ||
| HL_6H58_178 | GNRA | ||
| HL_6H58_179 | No text annotation | ||
| HL_6H58_180 | UNCG | ||
| HL_6H58_181 | GNRA | ||
| HL_6H58_182 | UNCG | ||
| HL_6H58_183 | GNRA wlth extra near cWW | ||
| HL_6H58_184 | No text annotation | ||
| HL_6H58_185 | GNRA-like with tWH | ||
| HL_6H58_186 | No text annotation | ||
| HL_6H58_187 | GNRA | ||
| HL_6H58_188 | No text annotation | ||
| HL_6H58_189 | No text annotation | ||
| HL_6H58_190 | GNRA | ||
| HL_6H58_191 | GNRA | ||
| HL_6H58_192 | No text annotation | ||
| HL_6H58_193 | GNRA | ||
| HL_6H58_194 | GNRA | ||
| HL_6H58_195 | T-loop related | ||
| HL_6H58_196 | No text annotation | ||
| HL_6H58_197 | GNRA | ||
| HL_6H58_198 | GNRA | ||
| HL_6H58_199 | T-loop with 3 stacked bulged bases | ||
| HL_6H58_200 | No text annotation | ||
| HL_6H58_201 | UNCG | ||
| HL_6H58_202 | GNRA | ||
| HL_6H58_203 | No text annotation | ||
| HL_6H58_204 | tRNA anticodon loop | ||
| HL_6H58_205 | T-loop with 2 stacked bulged bases | ||
| HL_6H58_206 | tRNA D-loop | ||
| HL_6H58_207 | tRNA anticodon loop | ||
| HL_6H58_208 | T-loop with 2 stacked bulged bases |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_6H58_001 | Triple sheared with non-canonical cWW | ||
| IL_6H58_002 | Single bulged A | ||
| IL_6H58_003 | Minor groove platform | ||
| IL_6H58_004 | No text annotation | ||
| IL_6H58_005 | Single stack bend | ||
| IL_6H58_006 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_6H58_007 | 7x6 Sarcin-Ricin; G-bulge | ||
| IL_6H58_008 | No text annotation | ||
| IL_6H58_009 | No text annotation | ||
| IL_6H58_363 | No text annotation | ||
| IL_6H58_010 | No text annotation | ||
| IL_6H58_011 | No text annotation | ||
| IL_6H58_012 | Double sheared | ||
| IL_6H58_013 | Isolated non-canonical cWW pair | ||
| IL_6H58_014 | AAA cross-strand stack | ||
| IL_6H58_015 | No text annotation | ||
| IL_6H58_016 | tHW-tHW cross-strand stack | ||
| IL_6H58_017 | Single bulged A | ||
| IL_6H58_018 | Single bulged G | ||
| IL_6H58_019 | Triple sheared | ||
| IL_6H58_020 | Major groove platform | ||
| IL_6H58_021 | Multiple bulged bases | ||
| IL_6H58_022 | 90 degree turn | ||
| IL_6H58_364 | No text annotation | ||
| IL_6H58_023 | Stack outside cWW | ||
| IL_6H58_024 | Single stack bend | ||
| IL_6H58_025 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | ||
| IL_6H58_026 | Single bulged G | ||
| IL_6H58_027 | C-loop with bulged stacked A's | ||
| IL_6H58_028 | Isolated non-canonical cWW pair | ||
| IL_6H58_029 | Double sheared with non-canonical cWW | ||
| IL_6H58_030 | No text annotation | ||
| IL_6H58_031 | Single bulged C | ||
| IL_6H58_032 | UAA/GAN | ||
| IL_6H58_033 | SSU/LSU pseudoknot | ||
| IL_6H58_034 | Single bulged U | ||
| IL_6H58_035 | Kink-turn related | ||
| IL_6H58_036 | No text annotation | ||
| IL_6H58_037 | Isolated non-canonical cWW pair | ||
| IL_6H58_038 | Tandem non-canonical cWW pairs | ||
| IL_6H58_039 | Kink-turn | ||
| IL_6H58_040 | No text annotation | ||
| IL_6H58_041 | Major groove platform | ||
| IL_6H58_042 | Isolated cWS basepair | ||
| IL_6H58_043 | No text annotation | ||
| IL_6H58_044 | Kink-turn | ||
| IL_6H58_045 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_6H58_046 | Major groove platform; stack outside cWW | ||
| IL_6H58_047 | C-loop | ||
| IL_6H58_048 | UAA/GAN | ||
| IL_6H58_049 | tSH-tHW-tHS | ||
| IL_6H58_050 | No text annotation | ||
| IL_6H58_051 | UAA/GAN | ||
| IL_6H58_052 | Tandem non-canonical cWW pairs | ||
| IL_6H58_053 | tSH-tHW | ||
| IL_6H58_054 | Single bulged U | ||
| IL_6H58_055 | No text annotation | ||
| IL_6H58_056 | tSH-tHW-tHS | ||
| IL_6H58_057 | 180 degree turn | ||
| IL_6H58_058 | Single bulged A | ||
| IL_6H58_059 | UAA/GAN variation | ||
| IL_6H58_060 | No text annotation | ||
| IL_6H58_061 | Isolated tWW turn | ||
| IL_6H58_062 | Major groove platform; stack outside cWW | ||
| IL_6H58_365 | No text annotation | ||
| IL_6H58_063 | Intercalated tWH | ||
| IL_6H58_064 | tSH-tSH-tHH-tHS | ||
| IL_6H58_065 | 6x5 Sarcin-Ricin; G-bulge | ||
| IL_6H58_066 | Triple sheared | ||
| IL_6H58_067 | Single bulged A | ||
| IL_6H58_068 | Kink-turn related | ||
| IL_6H58_069 | Minor groove platform, major groove intercalation | ||
| IL_6H58_070 | Major groove intercalation | ||
| IL_6H58_071 | Major groove minor groove platform; mini C-loop | ||
| IL_6H58_366 | No text annotation | ||
| IL_6H58_072 | UAA/GAN related | ||
| IL_6H58_073 | Bulged stacked bases | ||
| IL_6H58_074 | No text annotation | ||
| IL_6H58_075 | Major groove platform | ||
| IL_6H58_076 | No text annotation | ||
| IL_6H58_077 | Isolated non-canonical cWW pair | ||
| IL_6H58_078 | Minor groove platform | ||
| IL_6H58_079 | Isolated tHS basepair with bulges | ||
| IL_6H58_080 | Isolated non-canonical cWW pair | ||
| IL_6H58_081 | Isolated non-canonical cWW pair | ||
| IL_6H58_082 | Isolated non-canonical cWW pair | ||
| IL_6H58_083 | No text annotation | ||
| IL_6H58_084 | No text annotation | ||
| IL_6H58_085 | No text annotation | ||
| IL_6H58_086 | Single bulged U | ||
| IL_6H58_087 | Double sheared | ||
| IL_6H58_088 | Single bulged U | ||
| IL_6H58_089 | Single stack bend | ||
| IL_6H58_090 | Major groove platform | ||
| IL_6H58_091 | Major groove platform with extra pair | ||
| IL_6H58_092 | Major groove minor groove platform with extra cWW | ||
| IL_6H58_093 | Double sheared with non-canonical cWW | ||
| IL_6H58_094 | Major groove platform with extra pair | ||
| IL_6H58_095 | Isolated non-canonical cWW with bulges | ||
| IL_6H58_096 | No text annotation | ||
| IL_6H58_097 | Major groove platform with intercalation | ||
| IL_6H58_098 | Tandem non-canonical cWW pairs | ||
| IL_6H58_099 | Single bulged A | ||
| IL_6H58_100 | tSH-tHS-tHW | ||
| IL_6H58_101 | Sarcin-Ricin target in LSU H95; G-bulge | ||
| IL_6H58_102 | C-loop | ||
| IL_6H58_103 | UAA/GAN related, with intercalation | ||
| IL_6H58_104 | Multiple bulged bases | ||
| IL_6H58_105 | UAA/GAN with extra cWW | ||
| IL_6H58_106 | Single bulged A | ||
| IL_6H58_107 | No text annotation | ||
| IL_6H58_108 | Major groove intercalation | ||
| IL_6H58_109 | Multiple bulged bases with non-canonical cWW | ||
| IL_6H58_110 | tHS double platform | ||
| IL_6H58_111 | Triple sheared with non-canonical cWW | ||
| IL_6H58_112 | Single bulged A | ||
| IL_6H58_113 | Minor groove platform | ||
| IL_6H58_114 | No text annotation | ||
| IL_6H58_115 | Single stack bend | ||
| IL_6H58_116 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_6H58_117 | 7x6 Sarcin-Ricin; G-bulge | ||
| IL_6H58_118 | No text annotation | ||
| IL_6H58_119 | No text annotation | ||
| IL_6H58_367 | No text annotation | ||
| IL_6H58_120 | No text annotation | ||
| IL_6H58_121 | No text annotation | ||
| IL_6H58_122 | Double sheared | ||
| IL_6H58_123 | Isolated non-canonical cWW pair | ||
| IL_6H58_124 | AAA cross-strand stack | ||
| IL_6H58_125 | Isolated non-canonical cWW pair | ||
| IL_6H58_126 | tHW-tHW cross-strand stack | ||
| IL_6H58_127 | Single bulged A | ||
| IL_6H58_128 | Single bulged G | ||
| IL_6H58_129 | Triple sheared | ||
| IL_6H58_130 | Major groove platform | ||
| IL_6H58_131 | Multiple bulged bases | ||
| IL_6H58_132 | 90 degree turn | ||
| IL_6H58_368 | No text annotation | ||
| IL_6H58_133 | Stack outside cWW | ||
| IL_6H58_134 | Single stack bend | ||
| IL_6H58_135 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | ||
| IL_6H58_136 | Single bulged G | ||
| IL_6H58_137 | C-loop with bulged stacked A's | ||
| IL_6H58_138 | Isolated non-canonical cWW pair | ||
| IL_6H58_139 | Double sheared with non-canonical cWW | ||
| IL_6H58_140 | No text annotation | ||
| IL_6H58_141 | Single bulged C | ||
| IL_6H58_142 | UAA/GAN | ||
| IL_6H58_143 | SSU/LSU pseudoknot | ||
| IL_6H58_144 | Single bulged U | ||
| IL_6H58_145 | Kink-turn related | ||
| IL_6H58_146 | No text annotation | ||
| IL_6H58_147 | Isolated non-canonical cWW pair | ||
| IL_6H58_148 | Tandem non-canonical cWW pairs | ||
| IL_6H58_149 | Kink-turn | ||
| IL_6H58_150 | No text annotation | ||
| IL_6H58_151 | Major groove platform | ||
| IL_6H58_152 | Isolated cWS basepair | ||
| IL_6H58_153 | No text annotation | ||
| IL_6H58_154 | Kink-turn | ||
| IL_6H58_155 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_6H58_156 | Major groove platform; stack outside cWW | ||
| IL_6H58_157 | C-loop | ||
| IL_6H58_158 | UAA/GAN | ||
| IL_6H58_159 | tSH-tHW-tHS | ||
| IL_6H58_160 | No text annotation | ||
| IL_6H58_161 | UAA/GAN | ||
| IL_6H58_162 | Tandem non-canonical cWW pairs | ||
| IL_6H58_163 | tSH-tHW | ||
| IL_6H58_164 | Single bulged U | ||
| IL_6H58_165 | No text annotation | ||
| IL_6H58_166 | tSH-tHW-tHS | ||
| IL_6H58_167 | 180 degree turn | ||
| IL_6H58_168 | Single bulged A | ||
| IL_6H58_169 | UAA/GAN variation | ||
| IL_6H58_170 | No text annotation | ||
| IL_6H58_171 | Isolated tWW turn | ||
| IL_6H58_172 | Major groove platform; stack outside cWW | ||
| IL_6H58_369 | No text annotation | ||
| IL_6H58_173 | Intercalated tWH | ||
| IL_6H58_174 | tSH-tSH-tHH-tHS | ||
| IL_6H58_175 | 6x5 Sarcin-Ricin; G-bulge | ||
| IL_6H58_176 | Triple sheared | ||
| IL_6H58_177 | Single bulged A | ||
| IL_6H58_178 | Kink-turn related | ||
| IL_6H58_179 | Minor groove platform, major groove intercalation | ||
| IL_6H58_180 | Major groove intercalation | ||
| IL_6H58_181 | Major groove minor groove platform; mini C-loop | ||
| IL_6H58_370 | No text annotation | ||
| IL_6H58_182 | UAA/GAN related | ||
| IL_6H58_183 | Bulged stacked bases | ||
| IL_6H58_184 | No text annotation | ||
| IL_6H58_185 | Major groove platform | ||
| IL_6H58_186 | No text annotation | ||
| IL_6H58_187 | Isolated non-canonical cWW pair | ||
| IL_6H58_188 | Minor groove platform | ||
| IL_6H58_189 | Isolated tHS basepair with bulges | ||
| IL_6H58_190 | Isolated non-canonical cWW pair | ||
| IL_6H58_191 | Isolated non-canonical cWW pair | ||
| IL_6H58_192 | Isolated non-canonical cWW pair | ||
| IL_6H58_193 | No text annotation | ||
| IL_6H58_194 | No text annotation | ||
| IL_6H58_195 | No text annotation | ||
| IL_6H58_196 | Single bulged U | ||
| IL_6H58_197 | Double sheared | ||
| IL_6H58_198 | Single bulged U | ||
| IL_6H58_199 | Single stack bend | ||
| IL_6H58_200 | Major groove platform | ||
| IL_6H58_201 | Major groove platform with extra pair | ||
| IL_6H58_202 | Major groove minor groove platform with extra cWW | ||
| IL_6H58_203 | Double sheared with non-canonical cWW | ||
| IL_6H58_204 | Major groove platform with extra pair | ||
| IL_6H58_205 | Isolated non-canonical cWW with bulges | ||
| IL_6H58_206 | No text annotation | ||
| IL_6H58_207 | Major groove platform with intercalation | ||
| IL_6H58_208 | Tandem non-canonical cWW pairs | ||
| IL_6H58_209 | Single bulged A | ||
| IL_6H58_210 | tSH-tHS-tHW | ||
| IL_6H58_211 | Sarcin-Ricin target in LSU H95; G-bulge | ||
| IL_6H58_212 | C-loop | ||
| IL_6H58_213 | UAA/GAN related, with intercalation | ||
| IL_6H58_214 | Multiple bulged bases | ||
| IL_6H58_215 | UAA/GAN with extra cWW | ||
| IL_6H58_216 | Single bulged A | ||
| IL_6H58_217 | No text annotation | ||
| IL_6H58_218 | Major groove intercalation | ||
| IL_6H58_219 | Multiple bulged bases with non-canonical cWW | ||
| IL_6H58_220 | tHS double platform | ||
| IL_6H58_221 | Major groove intercalation | ||
| IL_6H58_222 | No text annotation | ||
| IL_6H58_223 | Major groove minor groove platform; mini C-loop | ||
| IL_6H58_224 | Symmetric double minor groove platform | ||
| IL_6H58_225 | Bacterial 5S Loop E | ||
| IL_6H58_226 | Major groove intercalation | ||
| IL_6H58_227 | No text annotation | ||
| IL_6H58_228 | Major groove minor groove platform; mini C-loop | ||
| IL_6H58_229 | Symmetric double minor groove platform | ||
| IL_6H58_230 | Bacterial 5S Loop E | ||
| IL_6H58_231 | Single bulged G | ||
| IL_6H58_232 | Single bulged A | ||
| IL_6H58_233 | No text annotation | ||
| IL_6H58_234 | Minor groove platform | ||
| IL_6H58_235 | Multiple bulged bases | ||
| IL_6H58_236 | Minor groove platform with extra cWW | ||
| IL_6H58_237 | Minor groove platform | ||
| IL_6H58_238 | Single bulged G | ||
| IL_6H58_239 | Isolated non-canonical cWW pair | ||
| IL_6H58_240 | No text annotation | ||
| IL_6H58_241 | Isolated cWH basepair | ||
| IL_6H58_242 | tWH-tWH-tHW-tHW | ||
| IL_6H58_243 | Minor groove platform | ||
| IL_6H58_244 | Kink-turn with non-sequential stacking | ||
| IL_6H58_245 | No text annotation | ||
| IL_6H58_246 | C-loop | ||
| IL_6H58_247 | Single bulged U | ||
| IL_6H58_248 | C-loop | ||
| IL_6H58_249 | Single bulged G | ||
| IL_6H58_250 | No text annotation | ||
| IL_6H58_251 | No text annotation | ||
| IL_6H58_252 | tSH-tHW-tWW | ||
| IL_6H58_253 | No text annotation | ||
| IL_6H58_254 | SSU/LSU pseudoknot | ||
| IL_6H58_255 | Kink-turn related | ||
| IL_6H58_256 | No text annotation | ||
| IL_6H58_257 | tSH-tHW-tHS | ||
| IL_6H58_258 | Major groove platform | ||
| IL_6H58_259 | Major groove minor groove platform; mini C-loop | ||
| IL_6H58_260 | No text annotation | ||
| IL_6H58_261 | Major groove platform; stack outside cWW | ||
| IL_6H58_262 | Single stack bend | ||
| IL_6H58_371 | Single stack bend | ||
| IL_6H58_263 | Tandem non-canonical cWW pairs | ||
| IL_6H58_372 | Triple non-canonical cWW pairs | ||
| IL_6H58_264 | No text annotation | ||
| IL_6H58_265 | Kink-turn | ||
| IL_6H58_266 | Left turn | ||
| IL_6H58_267 | tSH-tHW-tHS | ||
| IL_6H58_268 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | ||
| IL_6H58_269 | Single bulged A | ||
| IL_6H58_270 | Single bulged G | ||
| IL_6H58_271 | Minor groove platform | ||
| IL_6H58_272 | Minor groove platform | ||
| IL_6H58_273 | Minor groove platform | ||
| IL_6H58_274 | Single stack bend | ||
| IL_6H58_275 | No text annotation | ||
| IL_6H58_276 | Single bulged U | ||
| IL_6H58_277 | Isolated cWS basepair | ||
| IL_6H58_278 | Minor groove platform | ||
| IL_6H58_279 | Single bulged A | ||
| IL_6H58_280 | Isolated non-canonical cWW pair | ||
| IL_6H58_281 | No text annotation | ||
| IL_6H58_282 | Minor groove platform | ||
| IL_6H58_283 | No text annotation | ||
| IL_6H58_284 | No text annotation | ||
| IL_6H58_285 | 180 degree turn | ||
| IL_6H58_286 | Double sheared with non-canonical cWW | ||
| IL_6H58_287 | No text annotation | ||
| IL_6H58_288 | No text annotation | ||
| IL_6H58_289 | No text annotation | ||
| IL_6H58_290 | Isolated non-canonical cWW pair | ||
| IL_6H58_291 | Decoding loop related | ||
| IL_6H58_292 | Isolated non-canonical cWW pair | ||
| IL_6H58_293 | Double sheared | ||
| IL_6H58_294 | Triple sheared related | ||
| IL_6H58_295 | Minor groove platform | ||
| IL_6H58_296 | No text annotation | ||
| IL_6H58_297 | Single bulged G | ||
| IL_6H58_298 | Single bulged A | ||
| IL_6H58_299 | No text annotation | ||
| IL_6H58_300 | Minor groove platform | ||
| IL_6H58_301 | Multiple bulged bases | ||
| IL_6H58_302 | Minor groove platform with extra cWW | ||
| IL_6H58_303 | Minor groove platform | ||
| IL_6H58_304 | Single bulged G | ||
| IL_6H58_305 | Isolated non-canonical cWW pair | ||
| IL_6H58_306 | No text annotation | ||
| IL_6H58_307 | Isolated cWH basepair | ||
| IL_6H58_308 | tWH-tWH-tHW-tHW | ||
| IL_6H58_309 | Minor groove platform | ||
| IL_6H58_310 | Kink-turn with non-sequential stacking | ||
| IL_6H58_311 | No text annotation | ||
| IL_6H58_312 | C-loop | ||
| IL_6H58_313 | Single bulged U | ||
| IL_6H58_314 | C-loop | ||
| IL_6H58_315 | Single bulged G | ||
| IL_6H58_316 | No text annotation | ||
| IL_6H58_317 | No text annotation | ||
| IL_6H58_318 | tSH-tHW-tWW | ||
| IL_6H58_319 | No text annotation | ||
| IL_6H58_320 | SSU/LSU pseudoknot | ||
| IL_6H58_321 | Kink-turn related | ||
| IL_6H58_322 | No text annotation | ||
| IL_6H58_323 | tSH-tHW-tHS | ||
| IL_6H58_324 | Major groove platform | ||
| IL_6H58_325 | Major groove minor groove platform; mini C-loop | ||
| IL_6H58_326 | No text annotation | ||
| IL_6H58_327 | Major groove platform; stack outside cWW | ||
| IL_6H58_328 | Single stack bend | ||
| IL_6H58_373 | Single stack bend | ||
| IL_6H58_329 | Tandem non-canonical cWW pairs | ||
| IL_6H58_374 | Triple non-canonical cWW pairs | ||
| IL_6H58_330 | No text annotation | ||
| IL_6H58_331 | Kink-turn | ||
| IL_6H58_332 | Left turn | ||
| IL_6H58_333 | tSH-tHW-tHS | ||
| IL_6H58_334 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | ||
| IL_6H58_335 | Single bulged A | ||
| IL_6H58_336 | Single bulged G | ||
| IL_6H58_337 | Minor groove platform | ||
| IL_6H58_338 | No text annotation | ||
| IL_6H58_339 | Minor groove platform | ||
| IL_6H58_340 | Single stack bend | ||
| IL_6H58_341 | No text annotation | ||
| IL_6H58_342 | Single bulged U | ||
| IL_6H58_343 | Isolated cWS basepair | ||
| IL_6H58_344 | Minor groove platform | ||
| IL_6H58_345 | Single bulged U | ||
| IL_6H58_346 | Isolated non-canonical cWW pair | ||
| IL_6H58_347 | No text annotation | ||
| IL_6H58_348 | Minor groove platform | ||
| IL_6H58_349 | No text annotation | ||
| IL_6H58_350 | No text annotation | ||
| IL_6H58_351 | 180 degree turn | ||
| IL_6H58_352 | Double sheared with non-canonical cWW | ||
| IL_6H58_353 | No text annotation | ||
| IL_6H58_354 | No text annotation | ||
| IL_6H58_355 | No text annotation | ||
| IL_6H58_356 | Isolated non-canonical cWW pair | ||
| IL_6H58_357 | Decoding loop related | ||
| IL_6H58_358 | Isolated non-canonical cWW pair | ||
| IL_6H58_359 | Double sheared | ||
| IL_6H58_360 | Triple sheared related | ||
| IL_6H58_361 | Single bulged A | ||
| IL_6H58_362 | No text annotation |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_6H58_001 | No text annotation | ||
| J3_6H58_053 | No text annotation | ||
| J3_6H58_054 | No text annotation | ||
| J3_6H58_002 | No text annotation | ||
| J3_6H58_055 | No text annotation | ||
| J3_6H58_003 | No text annotation | ||
| J3_6H58_004 | No text annotation | ||
| J3_6H58_005 | No text annotation | ||
| J3_6H58_006 | No text annotation | ||
| J3_6H58_007 | No text annotation | ||
| J3_6H58_008 | No text annotation | ||
| J3_6H58_056 | No text annotation | ||
| J3_6H58_009 | Kink-turn 3-way junction | ||
| J3_6H58_057 | No text annotation | ||
| J3_6H58_010 | No text annotation | ||
| J3_6H58_011 | No text annotation | ||
| J3_6H58_012 | No text annotation | ||
| J3_6H58_013 | No text annotation | ||
| J3_6H58_014 | No text annotation | ||
| J3_6H58_058 | No text annotation | ||
| J3_6H58_059 | No text annotation | ||
| J3_6H58_015 | No text annotation | ||
| J3_6H58_060 | No text annotation | ||
| J3_6H58_016 | No text annotation | ||
| J3_6H58_017 | No text annotation | ||
| J3_6H58_018 | No text annotation | ||
| J3_6H58_019 | No text annotation | ||
| J3_6H58_020 | No text annotation | ||
| J3_6H58_021 | No text annotation | ||
| J3_6H58_061 | No text annotation | ||
| J3_6H58_022 | No text annotation | ||
| J3_6H58_062 | No text annotation | ||
| J3_6H58_023 | No text annotation | ||
| J3_6H58_024 | No text annotation | ||
| J3_6H58_025 | No text annotation | ||
| J3_6H58_026 | No text annotation | ||
| J3_6H58_027 | No text annotation | ||
| J3_6H58_028 | No text annotation | ||
| J3_6H58_029 | No text annotation | ||
| J3_6H58_063 | No text annotation | ||
| J3_6H58_030 | No text annotation | ||
| J3_6H58_064 | No text annotation | ||
| J3_6H58_031 | No text annotation | ||
| J3_6H58_032 | No text annotation | ||
| J3_6H58_033 | No text annotation | ||
| J3_6H58_034 | No text annotation | ||
| J3_6H58_035 | No text annotation | ||
| J3_6H58_036 | No text annotation | ||
| J3_6H58_065 | No text annotation | ||
| J3_6H58_037 | No text annotation | ||
| J3_6H58_071 | No text annotation | ||
| J3_6H58_038 | No text annotation | ||
| J3_6H58_039 | No text annotation | ||
| J3_6H58_066 | No text annotation | ||
| J3_6H58_040 | No text annotation | ||
| J3_6H58_041 | No text annotation | ||
| J3_6H58_067 | No text annotation | ||
| J3_6H58_042 | No text annotation | ||
| J3_6H58_068 | No text annotation | ||
| J3_6H58_043 | No text annotation | ||
| J3_6H58_044 | No text annotation | ||
| J3_6H58_045 | No text annotation | ||
| J3_6H58_046 | No text annotation | ||
| J3_6H58_047 | No text annotation | ||
| J3_6H58_048 | No text annotation | ||
| J3_6H58_069 | No text annotation | ||
| J3_6H58_049 | No text annotation | ||
| J3_6H58_072 | No text annotation | ||
| J3_6H58_050 | No text annotation | ||
| J3_6H58_051 | No text annotation | ||
| J3_6H58_070 | No text annotation | ||
| J3_6H58_052 | No text annotation | ||
| J4_6H58_001 | No text annotation | ||
| J4_6H58_002 | No text annotation | ||
| J4_6H58_003 | No text annotation | ||
| J4_6H58_004 | No text annotation | ||
| J4_6H58_005 | No text annotation | ||
| J4_6H58_006 | No text annotation | ||
| J4_6H58_007 | No text annotation | ||
| J4_6H58_008 | No text annotation | ||
| J4_6H58_009 | No text annotation | ||
| J4_6H58_010 | No text annotation | ||
| J4_6H58_011 | No text annotation | ||
| J4_6H58_012 | No text annotation | ||
| J4_6H58_013 | No text annotation | ||
| J4_6H58_014 | No text annotation | ||
| J4_6H58_015 | No text annotation | ||
| J4_6H58_016 | No text annotation | ||
| J4_6H58_017 | No text annotation | ||
| J4_6H58_018 | No text annotation | ||
| J4_6H58_019 | No text annotation | ||
| J4_6H58_020 | No text annotation | ||
| J4_6H58_021 | No text annotation | ||
| J4_6H58_022 | No text annotation | ||
| J4_6H58_023 | No text annotation | ||
| J4_6H58_024 | No text annotation | ||
| J4_6H58_025 | No text annotation | ||
| J4_6H58_026 | No text annotation | ||
| J4_6H58_027 | tRNA junction | ||
| J4_6H58_028 | tRNA junction | ||
| J5_6H58_001 | No text annotation | ||
| J5_6H58_002 | No text annotation | ||
| J5_6H58_003 | No text annotation | ||
| J5_6H58_004 | No text annotation | ||
| J5_6H58_005 | No text annotation | ||
| J5_6H58_006 | No text annotation | ||
| J5_6H58_007 | No text annotation | ||
| J5_6H58_008 | No text annotation | ||
| J5_6H58_009 | No text annotation | ||
| J5_6H58_010 | No text annotation | ||
| J5_6H58_011 | No text annotation | ||
| J5_6H58_012 | No text annotation | ||
| J5_6H58_013 | No text annotation | ||
| J5_6H58_014 | No text annotation | ||
| J5_6H58_015 | No text annotation | ||
| J5_6H58_016 | No text annotation | ||
| J5_6H58_017 | No text annotation | ||
| J5_6H58_018 | No text annotation | ||
| J6_6H58_001 | No text annotation | ||
| J6_6H58_002 | No text annotation | ||
| J6_6H58_003 | No text annotation | ||
| J6_6H58_004 | No text annotation | ||
| J7_6H58_001 | No text annotation | ||
| J7_6H58_002 | No text annotation | ||
| J7_6H58_003 | No text annotation | ||
| J7_6H58_004 | No text annotation |
Coloring options: