HL_6H58_109

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6H58|1|AA|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6H58_109 not in the Motif Atlas

Geometric match to HL_5J7L_175

Geometric discrepancy: 0.0749

The information below is about HL_5J7L_175

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6H58|1|AA|C|1691
6H58|1|AA|U|1692
6H58|1|AA|U|1693
6H58|1|AA|C|1694
6H58|1|AA|G|1695
6H58|1|AA|G|1696

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain CC

50S ribosomal protein L2

Chain aa

Small subunit ribosomal RNA; SSU rRNA