HL_6H58_183

3D structure

PDB id

6H58 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - Full 100S Hibernating E. coli Ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

6H58|1|aa|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6H58_183 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1714

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6H58|1|aa|G|462
6H58|1|aa|U|463
6H58|1|aa|U|464
6H58|1|aa|A|465
6H58|1|aa|A|466
6H58|1|aa|U|467
6H58|1|aa|A|468
6H58|1|aa|C|469
6H58|1|aa|C|470

Current chains

Chain aa

16S ribosomal RNA

Nearby chains