HL_6HA1_023
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUUGAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 6HA1|1|A|U|794, 6HA1|1|A|A|798, 6HA1|1|A|A|799
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HA1_023 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.0971
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
6HA1|1|A|C|791
6HA1|1|A|G|792
6HA1|1|A|U|793
6HA1|1|A|U|794
6HA1|1|A|G|795
6HA1|1|A|A|796
6HA1|1|A|A|797
6HA1|1|A|A|798
6HA1|1|A|A|799
6HA1|1|A|G|800
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L32
- Chain 2
- 50S ribosomal protein L34
- Chain D
- 50S ribosomal protein L3
- Chain S
- 50S ribosomal protein L22
Coloring options: