HL_6HA1_036

3D structure

PDB id

6HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAUUGGAUAUC

Length

12 nucleotides

Bulged bases

6HA1|1|A|U|1500, 6HA1|1|A|U|1501, 6HA1|1|A|U|1507

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HA1|1|A|G|1497
6HA1|1|A|U|1498
6HA1|1|A|A|1499
6HA1|1|A|U|1500
6HA1|1|A|U|1501
6HA1|1|A|G|1502
6HA1|1|A|G|1503
6HA1|1|A|A|1504
6HA1|1|A|U|1505
6HA1|1|A|A|1506
6HA1|1|A|U|1507
6HA1|1|A|C|1508

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L17