HL_6HA1_047

3D structure

PDB id

6HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

6HA1|1|A|A|1942, 6HA1|1|A|C|1943

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HA1|1|A|G|1939
6HA1|1|A|U|1940
6HA1|1|A|A|1941
6HA1|1|A|A|1942
6HA1|1|A|C|1943
6HA1|1|A|U|1944
6HA1|1|A|A|1945
6HA1|1|A|U|1946
6HA1|1|A|A|1947
6HA1|1|A|A|1948
6HA1|1|A|C|1949

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain x

Transfer RNA; tRNA