HL_6HA1_069
3D structure
- PDB id
- 6HA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a 70S Bacillus subtilis ribosome translating the ErmD leader peptide in complex with telithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUACCG
- Length
- 7 nucleotides
- Bulged bases
- 6HA1|1|B|A|39
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6HA1_069 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.1315
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
6HA1|1|B|C|36
6HA1|1|B|A|37
6HA1|1|B|U|38
6HA1|1|B|A|39
6HA1|1|B|C|40
6HA1|1|B|C|41
6HA1|1|B|G|42
Current chains
- Chain B
- 5S ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L31
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
- Chain O
- 50S ribosomal protein L18
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