HL_6HCF_118

3D structure

PDB id

6HCF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.9 Å

Loop

Sequence

CCCGCUCCCGUCGGCGGG

Length

18 nucleotides

Bulged bases

6HCF|1|52|G|638, 6HCF|1|52|U|639

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6HCF|1|52|C|515
6HCF|1|52|C|516
6HCF|1|52|C|517
6HCF|1|52|G|518
6HCF|1|52|C|519
6HCF|1|52|U|520
6HCF|1|52|C|521
6HCF|1|52|C|522
6HCF|1|52|C|523
6HCF|1|52|G|638
6HCF|1|52|U|639
6HCF|1|52|C|640
6HCF|1|52|G|641
6HCF|1|52|G|642
6HCF|1|52|C|643
6HCF|1|52|G|644
6HCF|1|52|G|645
6HCF|1|52|G|646

Current chains

Chain 52

28S ribosomal RNA

Nearby chains

Chain L3

eL13