3D structure

PDB id
6HCJ (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs
Experimental method
ELECTRON MICROSCOPY
Resolution
3.8 Å

Loop

Sequence
GGGUUCAGAUCCCC
Length
14 nucleotides
Bulged bases
6HCJ|1|51|U|2530
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6HCJ|1|51|G|2521
6HCJ|1|51|G|2522
6HCJ|1|51|G|2523
6HCJ|1|51|U|2524
6HCJ|1|51|U|2525
6HCJ|1|51|C|2526
6HCJ|1|51|A|2527
6HCJ|1|51|G|2528
6HCJ|1|51|A|2529
6HCJ|1|51|U|2530
6HCJ|1|51|C|2531
6HCJ|1|51|C|2532
6HCJ|1|51|C|2533
6HCJ|1|51|C|2534

Current chains

Chain 51
28S ribosomal RNA

Nearby chains

Chain R3
eL19
Chain X3
uL23
Chain g3
eL34
Chain k3
eL38

Coloring options:

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